Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO35_RS05295 | Genome accession | NZ_CP123074 |
| Coordinates | 1093109..1093534 (+) | Length | 141 a.a. |
| NCBI ID | WP_000934384.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SW-MRSA61 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1088109..1098534
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO35_RS05230 (QAO35_05250) | - | 1088154..1088396 (+) | 243 | WP_000639923.1 | DUF739 family protein | - |
| QAO35_RS05235 (QAO35_05255) | - | 1088409..1088669 (+) | 261 | WP_000435341.1 | transcriptional regulator | - |
| QAO35_RS05240 (QAO35_05260) | - | 1088693..1089231 (-) | 539 | Protein_1021 | hypothetical protein | - |
| QAO35_RS05245 (QAO35_05265) | - | 1089288..1090043 (+) | 756 | WP_001148341.1 | phage antirepressor KilAC domain-containing protein | - |
| QAO35_RS05250 (QAO35_05270) | - | 1090060..1090200 (+) | 141 | WP_000939500.1 | hypothetical protein | - |
| QAO35_RS05255 (QAO35_05275) | - | 1090215..1090847 (-) | 633 | WP_001814660.1 | hypothetical protein | - |
| QAO35_RS05260 (QAO35_05280) | - | 1090903..1091229 (+) | 327 | WP_001025595.1 | hypothetical protein | - |
| QAO35_RS05265 (QAO35_05285) | - | 1091226..1091325 (+) | 100 | Protein_1026 | hypothetical protein | - |
| QAO35_RS05270 (QAO35_05290) | - | 1091474..1091737 (+) | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| QAO35_RS05275 (QAO35_05295) | - | 1091749..1091910 (+) | 162 | WP_000066021.1 | DUF1270 family protein | - |
| QAO35_RS05280 (QAO35_05300) | - | 1092002..1092262 (+) | 261 | WP_000291076.1 | DUF1108 family protein | - |
| QAO35_RS05285 (QAO35_05305) | - | 1092272..1092493 (+) | 222 | WP_000815403.1 | DUF2483 family protein | - |
| QAO35_RS05290 (QAO35_05310) | - | 1092486..1093109 (+) | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| QAO35_RS05295 (QAO35_05315) | ssbA | 1093109..1093534 (+) | 426 | WP_000934384.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO35_RS05300 (QAO35_05320) | - | 1093545..1094096 (+) | 552 | WP_001004506.1 | NUMOD4 domain-containing protein | - |
| QAO35_RS05305 (QAO35_05325) | - | 1094097..1094771 (+) | 675 | WP_015445893.1 | putative HNHc nuclease | - |
| QAO35_RS05310 (QAO35_05330) | - | 1094764..1095519 (+) | 756 | WP_001037657.1 | DnaD domain protein | - |
| QAO35_RS05315 (QAO35_05335) | - | 1095519..1095875 (+) | 357 | WP_001132243.1 | hypothetical protein | - |
| QAO35_RS05320 (QAO35_05340) | - | 1095872..1097113 (+) | 1242 | WP_015445891.1 | DnaB helicase C-terminal domain-containing protein | - |
| QAO35_RS05325 (QAO35_05345) | - | 1097110..1097325 (+) | 216 | WP_001024405.1 | hypothetical protein | - |
| QAO35_RS05330 (QAO35_05350) | - | 1097329..1097550 (+) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| QAO35_RS05335 (QAO35_05355) | - | 1097560..1097985 (+) | 426 | WP_000451861.1 | phage N-6-adenine-methyltransferase | - |
| QAO35_RS05340 (QAO35_05360) | - | 1097982..1098386 (+) | 405 | WP_031895320.1 | DUF1064 domain-containing protein | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15784.48 Da Isoelectric Point: 8.4826
>NTDB_id=818203 QAO35_RS05295 WP_000934384.1 1093109..1093534(+) (ssbA) [Staphylococcus aureus strain SW-MRSA61]
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNNADSIEDLPF
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNNADSIEDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=818203 QAO35_RS05295 WP_000934384.1 1093109..1093534(+) (ssbA) [Staphylococcus aureus strain SW-MRSA61]
ATGTTAAACAGAGCAGTATTAGTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCGCGCCAAATGGCGTAAATGTAGG
TACATTCACATTGGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAGAAACAAGCTGAAAATGTTAAAAACTACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGGCGATTACAAACACGT
AGCTACGAAAATAAAGTCGGGCAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG
ATGTTAAACAGAGCAGTATTAGTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCGCGCCAAATGGCGTAAATGTAGG
TACATTCACATTGGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAGAAACAAGCTGAAAATGTTAAAAACTACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGGCGATTACAAACACGT
AGCTACGAAAATAAAGTCGGGCAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
73.729 |
83.688 |
0.617 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.603 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
75.177 |
0.44 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
41.844 |
100 |
0.418 |
| ssbA | Streptococcus mutans UA159 |
46.087 |
81.56 |
0.376 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
44.068 |
83.688 |
0.369 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
44.068 |
83.688 |
0.369 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
44.068 |
83.688 |
0.369 |
| ssbB/cilA | Streptococcus mitis SK321 |
44.068 |
83.688 |
0.369 |