Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO15_RS14655 | Genome accession | NZ_CP122485 |
| Coordinates | 2914067..2914492 (+) | Length | 141 a.a. |
| NCBI ID | WP_000934384.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SW-MRSA57 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2892718..2923519 | 2914067..2914492 | within | 0 |
Gene organization within MGE regions
Location: 2892718..2923519
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO15_RS14510 (QAO15_14530) | groES | 2892718..2893002 (+) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| QAO15_RS14515 (QAO15_14535) | groL | 2893078..2894694 (+) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| QAO15_RS14520 (QAO15_14540) | - | 2895357..2896676 (+) | 1320 | WP_001557163.1 | ISL3-like element IS1181 family transposase | - |
| QAO15_RS14525 (QAO15_14550) | - | 2896754..2898061 (-) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| QAO15_RS14530 (QAO15_14555) | - | 2898505..2899728 (-) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| QAO15_RS14535 (QAO15_14560) | - | 2900067..2901239 (+) | 1173 | WP_000195429.1 | IS256-like element IS256 family transposase | - |
| QAO15_RS14540 (QAO15_14565) | lukH | 2901496..2902551 (+) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| QAO15_RS14545 (QAO15_14570) | lukG | 2902573..2903589 (+) | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| QAO15_RS14550 (QAO15_14575) | sph | 2903827..2904651 (-) | 825 | Protein_2830 | sphingomyelin phosphodiesterase | - |
| QAO15_RS14555 (QAO15_14580) | - | 2904708..2905745 (-) | 1038 | WP_000857198.1 | tyrosine-type recombinase/integrase | - |
| QAO15_RS14560 (QAO15_14585) | - | 2905918..2906457 (-) | 540 | WP_000391618.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QAO15_RS14565 (QAO15_14590) | - | 2906597..2906764 (-) | 168 | WP_000705238.1 | hypothetical protein | - |
| QAO15_RS14570 (QAO15_14595) | - | 2906964..2907149 (-) | 186 | WP_000100503.1 | hypothetical protein | - |
| QAO15_RS14575 (QAO15_14600) | - | 2907146..2907292 (-) | 147 | WP_000345949.1 | hypothetical protein | - |
| QAO15_RS14580 (QAO15_14605) | - | 2907366..2908220 (-) | 855 | WP_001557601.1 | HIRAN domain-containing protein | - |
| QAO15_RS14585 (QAO15_14610) | - | 2908232..2908948 (-) | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| QAO15_RS14590 (QAO15_14615) | - | 2909112..2909354 (+) | 243 | WP_000639923.1 | DUF739 family protein | - |
| QAO15_RS14595 (QAO15_14620) | - | 2909367..2909627 (+) | 261 | WP_000435341.1 | transcriptional regulator | - |
| QAO15_RS14600 (QAO15_14625) | - | 2909651..2910189 (-) | 539 | Protein_2840 | hypothetical protein | - |
| QAO15_RS14605 (QAO15_14630) | - | 2910246..2911001 (+) | 756 | WP_001148341.1 | phage antirepressor KilAC domain-containing protein | - |
| QAO15_RS14610 (QAO15_14635) | - | 2911018..2911158 (+) | 141 | WP_000939500.1 | hypothetical protein | - |
| QAO15_RS14615 (QAO15_14640) | - | 2911173..2911805 (-) | 633 | WP_001814660.1 | hypothetical protein | - |
| QAO15_RS14620 (QAO15_14645) | - | 2911861..2912187 (+) | 327 | WP_001025595.1 | hypothetical protein | - |
| QAO15_RS14625 (QAO15_14650) | - | 2912184..2912283 (+) | 100 | Protein_2845 | hypothetical protein | - |
| QAO15_RS14630 (QAO15_14655) | - | 2912432..2912695 (+) | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| QAO15_RS14635 (QAO15_14660) | - | 2912707..2912868 (+) | 162 | WP_000066021.1 | DUF1270 family protein | - |
| QAO15_RS14640 (QAO15_14665) | - | 2912960..2913220 (+) | 261 | WP_000291076.1 | DUF1108 family protein | - |
| QAO15_RS14645 (QAO15_14670) | - | 2913230..2913451 (+) | 222 | WP_000815403.1 | DUF2483 family protein | - |
| QAO15_RS14650 (QAO15_14675) | - | 2913444..2914067 (+) | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| QAO15_RS14655 (QAO15_14680) | ssbA | 2914067..2914492 (+) | 426 | WP_000934384.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO15_RS14660 (QAO15_14685) | - | 2914503..2915054 (+) | 552 | WP_001004506.1 | NUMOD4 domain-containing protein | - |
| QAO15_RS14665 (QAO15_14690) | - | 2915055..2915729 (+) | 675 | WP_015445893.1 | putative HNHc nuclease | - |
| QAO15_RS14670 (QAO15_14695) | - | 2915722..2916477 (+) | 756 | WP_001037657.1 | DnaD domain protein | - |
| QAO15_RS14675 (QAO15_14700) | - | 2916477..2916833 (+) | 357 | WP_001132243.1 | hypothetical protein | - |
| QAO15_RS14680 (QAO15_14705) | - | 2916830..2918071 (+) | 1242 | WP_015445891.1 | DnaB helicase C-terminal domain-containing protein | - |
| QAO15_RS14685 (QAO15_14710) | - | 2918068..2918283 (+) | 216 | WP_001024405.1 | hypothetical protein | - |
| QAO15_RS14690 (QAO15_14715) | - | 2918287..2918508 (+) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| QAO15_RS14695 (QAO15_14720) | - | 2918518..2918943 (+) | 426 | WP_000451861.1 | phage N-6-adenine-methyltransferase | - |
| QAO15_RS14700 (QAO15_14725) | - | 2918940..2919344 (+) | 405 | WP_031895320.1 | DUF1064 domain-containing protein | - |
| QAO15_RS14705 (QAO15_14730) | - | 2919349..2919534 (+) | 186 | WP_001187230.1 | DUF3113 family protein | - |
| QAO15_RS14710 (QAO15_14735) | - | 2919620..2919874 (+) | 255 | WP_000022735.1 | DUF3310 domain-containing protein | - |
| QAO15_RS14715 (QAO15_14740) | - | 2919874..2920122 (+) | 249 | WP_012068339.1 | SAV1978 family virulence-associated passenger protein | - |
| QAO15_RS14720 (QAO15_14745) | - | 2920135..2920536 (+) | 402 | WP_000695762.1 | hypothetical protein | - |
| QAO15_RS14725 (QAO15_14750) | - | 2920533..2920880 (+) | 348 | WP_000979209.1 | YopX family protein | - |
| QAO15_RS14730 (QAO15_14755) | - | 2920877..2921185 (+) | 309 | WP_000144710.1 | hypothetical protein | - |
| QAO15_RS14735 (QAO15_14760) | - | 2921178..2921426 (+) | 249 | WP_031895328.1 | DUF1024 family protein | - |
| QAO15_RS14740 (QAO15_14765) | - | 2921419..2921955 (+) | 537 | WP_000185680.1 | dUTPase | - |
| QAO15_RS14745 (QAO15_14770) | - | 2921992..2922198 (+) | 207 | WP_000195820.1 | DUF1381 domain-containing protein | - |
| QAO15_RS14750 (QAO15_14775) | rinB | 2922195..2922344 (+) | 150 | Protein_2870 | transcriptional activator RinB | - |
| QAO15_RS14755 (QAO15_14780) | - | 2922344..2922544 (+) | 201 | WP_000265041.1 | DUF1514 family protein | - |
| QAO15_RS14760 (QAO15_14785) | - | 2922572..2922988 (+) | 417 | WP_000590126.1 | hypothetical protein | - |
| QAO15_RS14765 (QAO15_14790) | - | 2923220..2923519 (+) | 300 | WP_000988336.1 | HNH endonuclease | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15784.48 Da Isoelectric Point: 8.4826
>NTDB_id=815869 QAO15_RS14655 WP_000934384.1 2914067..2914492(+) (ssbA) [Staphylococcus aureus strain SW-MRSA57]
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNNADSIEDLPF
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNNADSIEDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=815869 QAO15_RS14655 WP_000934384.1 2914067..2914492(+) (ssbA) [Staphylococcus aureus strain SW-MRSA57]
ATGTTAAACAGAGCAGTATTAGTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCGCGCCAAATGGCGTAAATGTAGG
TACATTCACATTGGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAGAAACAAGCTGAAAATGTTAAAAACTACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGGCGATTACAAACACGT
AGCTACGAAAATAAAGTCGGGCAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG
ATGTTAAACAGAGCAGTATTAGTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCGCGCCAAATGGCGTAAATGTAGG
TACATTCACATTGGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAGAAACAAGCTGAAAATGTTAAAAACTACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGGCGATTACAAACACGT
AGCTACGAAAATAAAGTCGGGCAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
73.729 |
83.688 |
0.617 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.603 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
75.177 |
0.44 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
41.844 |
100 |
0.418 |
| ssbA | Streptococcus mutans UA159 |
46.087 |
81.56 |
0.376 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
44.068 |
83.688 |
0.369 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
44.068 |
83.688 |
0.369 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
44.068 |
83.688 |
0.369 |
| ssbB/cilA | Streptococcus mitis SK321 |
44.068 |
83.688 |
0.369 |