Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | P5647_RS00095 | Genome accession | NZ_CP120622 |
| Coordinates | 14650..14940 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain DSM 1090 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 9650..19940
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5647_RS00055 (P5647_00055) | darA | 9673..10002 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| P5647_RS00060 (P5647_00060) | yaaR | 10015..10455 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| P5647_RS00065 (P5647_00065) | holB | 10467..11456 (+) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| P5647_RS00070 (P5647_00070) | ricT | 11459..12286 (+) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| P5647_RS00075 (P5647_00075) | yabA | 12301..12660 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| P5647_RS00080 (P5647_00080) | trmNF | 12719..13462 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| P5647_RS00085 (P5647_00085) | yazA | 13449..13748 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| P5647_RS00090 (P5647_00090) | rsmI | 13723..14601 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| P5647_RS00095 (P5647_00095) | abrB | 14650..14940 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| P5647_RS00100 (P5647_00100) | metG | 15435..17429 (+) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| P5647_RS00105 (P5647_00105) | dayD | 17508..18275 (+) | 768 | WP_003226756.1 | TatD family hydrolase | - |
| P5647_RS00110 (P5647_00110) | yabE | 18431..19744 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=807091 P5647_RS00095 WP_003226760.1 14650..14940(-) (abrB) [Bacillus subtilis strain DSM 1090]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=807091 P5647_RS00095 WP_003226760.1 14650..14940(-) (abrB) [Bacillus subtilis strain DSM 1090]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |