Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   P5657_RS19990 Genome accession   NZ_CP120621
Coordinates   3756508..3757302 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain DSM 13019     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3751508..3762302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5657_RS19955 (P5657_19955) ephM 3752351..3753211 (-) 861 WP_125121374.1 epoxide hydrolase EphM -
  P5657_RS19960 (P5657_19960) spdL 3753213..3753530 (-) 318 WP_021481164.1 SdpC immunity protein SpdL -
  P5657_RS19965 (P5657_19965) yfhK 3753615..3754133 (-) 519 WP_085187167.1 SH3 domain-containing protein -
  P5657_RS19970 (P5657_19970) yfhJ 3754278..3754547 (-) 270 WP_003243789.1 YfhJ family protein -
  P5657_RS19975 (P5657_19975) sspK 3754672..3754824 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  P5657_RS19980 (P5657_19980) yfhI 3754856..3756049 (-) 1194 WP_021481165.1 MFS transporter -
  P5657_RS19985 (P5657_19985) yfhH 3756192..3756506 (-) 315 WP_003244592.1 YfhH family protein -
  P5657_RS19990 (P5657_19990) recX 3756508..3757302 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  P5657_RS19995 (P5657_19995) yfhF 3757391..3758302 (+) 912 WP_103803364.1 TIGR01777 family oxidoreductase -
  P5657_RS20000 (P5657_20000) yfhE 3758357..3758467 (+) 111 WP_003223230.1 YfhE family protein -
  P5657_RS20005 (P5657_20005) yfhD 3758534..3758725 (+) 192 WP_003233561.1 YfhD family protein -
  P5657_RS20010 (P5657_20010) yfhC 3758764..3759348 (-) 585 WP_003243940.1 nitroreductase -
  P5657_RS20015 (P5657_20015) yfhB 3759436..3760317 (-) 882 WP_125121377.1 PhzF family phenazine biosynthesis isomerase -
  P5657_RS20020 (P5657_20020) sxzA 3760432..3761463 (-) 1032 WP_003233568.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=807090 P5657_RS19990 WP_003243354.1 3756508..3757302(-) (recX) [Bacillus subtilis strain DSM 13019]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=807090 P5657_RS19990 WP_003243354.1 3756508..3757302(-) (recX) [Bacillus subtilis strain DSM 13019]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1