Detailed information NTG0799411

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: P0M04_RS03205
• Genome accession: NZ_CP119520
• Coordinates: 733332..734570 (+)
• Length: 412 a.a.
• NCBI ID: WP_259448788.1
• Uniprot ID: -
• Organism: Telluria mixta strain ACM 1762
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 728332..739570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P0M04_RS03190 (P0M04_03190)	-	729228..729911 (+)	684	WP_259448791.1	hypothetical protein	-
P0M04_RS03195 (P0M04_03195)	-	730035..731342 (+)	1308	WP_259448790.1	HlyC/CorC family transporter	-
P0M04_RS03200 (P0M04_03200)	pilB	731589..733322 (+)	1734	WP_259448789.1	type IV-A pilus assembly ATPase PilB	Machinery gene
P0M04_RS03205 (P0M04_03205)	pilC	733332..734570 (+)	1239	WP_259448788.1	type II secretion system F family protein	Machinery gene
P0M04_RS03210 (P0M04_03210)	-	735123..735407 (+)	285	WP_259448787.1	hypothetical protein	-
P0M04_RS03215 (P0M04_03215)	-	735478..736350 (+)	873	WP_259448786.1	hypothetical protein	-
P0M04_RS03220 (P0M04_03220)	-	736457..737644 (-)	1188	WP_259448785.1	phospholipase D-like domain-containing protein	-

Sequence

Protein

• Length: 412 a.a.
• Molecular weight: 45157.30 Da
• Isoelectric Point: 10.0537

>NTDB_id=799411 P0M04_RS03205 WP_259448788.1 733332..734570(+) (pilC) [Telluria mixta strain ACM 1762]
MATTSAPARRAQSAQVKEHIFAWEGKDKTGKTVRGEMRAGGETIVNVTLRRQGIMVTKVKKKVYRSGKKIQDKDLTLFTR
QLATMMKAGVPLLQSFDIVGKGHANPSMSKLIMDLRADIETGTSLNNAFRKYPLYFDPLFCNLVGAGEQAGILEDLLTRL
AIYKEKTLALKSKIKGALMYPCAIIAIAFIVTAVIMIWVVPAFKSVFSSFGADLPAPTLIVMSISDFVVQWWYIIFGSIF
GALYFFFQSWRRSLKVQQAMDRILLRVPVFGEVVRKATIARWTRTLSTMFAAGVPLVEALDSVGGASGNNVYLEATKKIQ
TEVSTGTSLTVAMQNANVFPNMVTQMVSIGEESGALDGMLGKVADFYEEEVDEAVKALSSLMEPMIMVILGVLIGGLVVA
MYLPIFKLGSVV

Nucleotide

• Length: 1239 bp

>NTDB_id=799411 P0M04_RS03205 WP_259448788.1 733332..734570(+) (pilC) [Telluria mixta strain ACM 1762]
ATGGCAACGACATCCGCCCCGGCACGCCGCGCGCAGAGCGCGCAGGTCAAGGAACACATCTTCGCCTGGGAAGGCAAGGA
CAAGACGGGCAAGACCGTGCGCGGCGAAATGCGCGCCGGCGGCGAGACCATCGTGAACGTGACCCTGCGCCGCCAGGGCA
TCATGGTCACCAAGGTCAAGAAGAAGGTGTACCGCAGCGGCAAGAAGATCCAGGACAAGGACCTCACGCTGTTCACGCGC
CAGCTGGCCACGATGATGAAGGCCGGCGTGCCGTTGCTGCAATCGTTCGACATCGTCGGCAAGGGCCATGCGAATCCGTC
GATGTCCAAGCTGATCATGGACTTGCGCGCCGACATCGAGACGGGTACCAGCCTGAACAACGCCTTCCGCAAATACCCGC
TGTATTTCGACCCGCTGTTCTGCAACCTCGTGGGCGCCGGCGAGCAGGCCGGCATTCTCGAAGACTTATTAACACGCCTG
GCGATCTACAAGGAAAAGACGCTCGCGCTGAAGAGCAAGATCAAGGGCGCGCTGATGTACCCGTGCGCGATCATCGCCAT
CGCCTTCATCGTCACCGCCGTGATCATGATCTGGGTGGTGCCCGCGTTCAAATCCGTGTTCTCCAGCTTCGGCGCGGACC
TGCCGGCCCCGACCCTGATCGTGATGTCCATCTCGGATTTCGTGGTGCAATGGTGGTATATCATCTTCGGCTCGATCTTC
GGTGCCCTGTACTTCTTCTTCCAGTCGTGGCGCCGGTCACTCAAAGTGCAGCAGGCCATGGACCGCATCCTGCTGCGCGT
TCCCGTGTTCGGCGAAGTGGTCCGCAAGGCCACGATCGCCCGCTGGACCCGCACGCTGTCGACGATGTTCGCGGCCGGCG
TGCCCCTCGTGGAAGCGCTGGACTCCGTGGGCGGCGCGTCCGGCAACAACGTCTACCTGGAAGCCACGAAAAAGATCCAG
ACGGAAGTCAGCACGGGCACGAGCCTGACGGTCGCGATGCAGAACGCCAATGTCTTCCCGAACATGGTCACGCAAATGGT
CTCCATCGGCGAGGAATCAGGCGCCCTGGACGGCATGCTGGGCAAGGTGGCCGACTTCTACGAGGAAGAAGTGGACGAGG
CCGTCAAGGCGCTGTCGTCGCTGATGGAGCCCATGATCATGGTCATCCTGGGCGTGCTGATCGGTGGCCTTGTCGTGGCC
ATGTATCTGCCGATCTTCAAGCTGGGGTCGGTGGTCTGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (78-201)

• Type II secretion system (T2SS), protein F (T2SSF) (282-404)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Pseudomonas stutzeri DSM 10701	54.815	98.301	0.539
pilC	Legionella pneumophila strain ERS1305867	54.798	96.117	0.527
pilG	Neisseria gonorrhoeae MS11	52.141	96.359	0.502
pilG	Neisseria meningitidis 44/76-A	51.889	96.359	0.5
pilC	Acinetobacter baumannii D1279779	51.134	96.359	0.493
pilC	Acinetobacter baylyi ADP1	51.005	96.602	0.493
pilC	Vibrio campbellii strain DS40M4	39.899	96.117	0.383
pilC	Vibrio cholerae strain A1552	39.798	96.359	0.383