Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | PWP91_RS02900 | Genome accession | NZ_CP118738 |
| Coordinates | 571083..571472 (+) | Length | 129 a.a. |
| NCBI ID | WP_010905314.1 | Uniprot ID | S6EQX8 |
| Organism | Lactococcus lactis strain P-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 566083..576472
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PWP91_RS02875 (PWP91_02875) | pepA | 566966..568033 (-) | 1068 | WP_033900468.1 | glutamyl aminopeptidase | - |
| PWP91_RS02880 (PWP91_02880) | - | 568136..568420 (+) | 285 | WP_012897223.1 | hypothetical protein | - |
| PWP91_RS02885 (PWP91_02885) | - | 568462..568779 (+) | 318 | WP_003131595.1 | thioredoxin family protein | - |
| PWP91_RS02890 (PWP91_02890) | ytpR | 568865..569491 (+) | 627 | WP_058204083.1 | YtpR family tRNA-binding protein | - |
| PWP91_RS02895 (PWP91_02895) | nox | 569653..570993 (+) | 1341 | WP_023188995.1 | H2O-forming NADH oxidase | - |
| PWP91_RS02900 (PWP91_02900) | ssbB | 571083..571472 (+) | 390 | WP_010905314.1 | single-stranded DNA-binding protein | Machinery gene |
| PWP91_RS02905 (PWP91_02905) | groES | 571592..571876 (+) | 285 | WP_003131589.1 | co-chaperone GroES | - |
| PWP91_RS02910 (PWP91_02910) | groL | 571964..573592 (+) | 1629 | WP_003131585.1 | chaperonin GroEL | - |
| PWP91_RS02915 (PWP91_02915) | - | 573639..574451 (-) | 813 | WP_003131583.1 | MBL fold metallo-hydrolase | - |
| PWP91_RS02920 (PWP91_02920) | - | 574622..576064 (-) | 1443 | WP_274998800.1 | sensor histidine kinase | - |
Sequence
Protein
Download Length: 129 a.a. Molecular weight: 14672.73 Da Isoelectric Point: 8.3705
>NTDB_id=794796 PWP91_RS02900 WP_010905314.1 571083..571472(+) (ssbB) [Lactococcus lactis strain P-1]
MNKTMLIGRLTSAPEISKTTNDKSYVRVTLAVNRRFKNEKGEREADFISIIIWGKSAETLVSYAKKGSLISIEGEIRTRN
YTDKQNQKHYVTEILGLSYDLLESRATIALRESAIKTEETLLDAEELPF
MNKTMLIGRLTSAPEISKTTNDKSYVRVTLAVNRRFKNEKGEREADFISIIIWGKSAETLVSYAKKGSLISIEGEIRTRN
YTDKQNQKHYVTEILGLSYDLLESRATIALRESAIKTEETLLDAEELPF
Nucleotide
Download Length: 390 bp
>NTDB_id=794796 PWP91_RS02900 WP_010905314.1 571083..571472(+) (ssbB) [Lactococcus lactis strain P-1]
ATGAATAAAACCATGTTAATTGGACGCTTAACCAGTGCGCCAGAAATTTCAAAAACAACAAATGATAAATCATATGTCCG
TGTGACCTTGGCAGTCAATCGCCGTTTCAAAAATGAAAAAGGAGAACGAGAGGCAGATTTTATTTCAATTATTATTTGGG
GAAAATCTGCAGAAACTTTAGTTTCTTACGCAAAAAAAGGAAGTCTTATTTCAATTGAAGGAGAAATCAGAACTAGAAAT
TATACGGATAAGCAAAATCAAAAACATTATGTCACAGAAATCTTAGGGCTGAGTTATGATTTACTTGAAAGTAGGGCAAC
AATCGCTTTACGAGAAAGCGCTATAAAGACTGAAGAAACCTTACTTGATGCGGAAGAACTCCCTTTCTAA
ATGAATAAAACCATGTTAATTGGACGCTTAACCAGTGCGCCAGAAATTTCAAAAACAACAAATGATAAATCATATGTCCG
TGTGACCTTGGCAGTCAATCGCCGTTTCAAAAATGAAAAAGGAGAACGAGAGGCAGATTTTATTTCAATTATTATTTGGG
GAAAATCTGCAGAAACTTTAGTTTCTTACGCAAAAAAAGGAAGTCTTATTTCAATTGAAGGAGAAATCAGAACTAGAAAT
TATACGGATAAGCAAAATCAAAAACATTATGTCACAGAAATCTTAGGGCTGAGTTATGATTTACTTGAAAGTAGGGCAAC
AATCGCTTTACGAGAAAGCGCTATAAAGACTGAAGAAACCTTACTTGATGCGGAAGAACTCCCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
90.698 |
100 |
0.907 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
60.769 |
100 |
0.612 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
56.923 |
100 |
0.574 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
56.154 |
100 |
0.566 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
56.154 |
100 |
0.566 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
56.154 |
100 |
0.566 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
56.154 |
100 |
0.566 |
| ssbB/cilA | Streptococcus mitis SK321 |
56.154 |
100 |
0.566 |
| ssbA | Streptococcus mutans UA159 |
55.385 |
100 |
0.558 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
43.75 |
86.822 |
0.38 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
44.762 |
81.395 |
0.364 |