Detailed information NTG0794671

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: PW220_RS00835
• Genome accession: NZ_CP118734
• Coordinates: 136527..136922 (+)
• Length: 131 a.a.
• NCBI ID: WP_044678997.1
• Uniprot ID: A0A0Z8JN20
• Organism: Streptococcus iners subsp. hyiners strain 29892
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 131527..141922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PW220_RS00795 (PW220_00795)	pepA	131648..132709 (-)	1062	WP_248055953.1	glutamyl aminopeptidase	-
PW220_RS00800 (PW220_00800)	-	133159..133443 (+)	285	WP_002940015.1	DUF4651 domain-containing protein	-
PW220_RS00805 (PW220_00805)	-	133440..133760 (+)	321	WP_248055954.1	thioredoxin family protein	-
PW220_RS00810 (PW220_00810)	-	134126..135082 (+)	957	WP_248055955.1	DUF1002 domain-containing protein	-
PW220_RS00815 (PW220_00815)	ytpR	135101..135724 (+)	624	WP_248055956.1	YtpR family tRNA-binding protein	-
PW220_RS00820 (PW220_00820)	-	135829..135960 (+)	132	WP_316716439.1	hypothetical protein	-
PW220_RS00825 (PW220_00825)	-	135954..136208 (-)	255	WP_248055957.1	DUF2785 domain-containing protein	-
PW220_RS00830 (PW220_00830)	-	136236..136472 (-)	237	WP_248055958.1	hypothetical protein	-
PW220_RS00835 (PW220_00835)	ssbA	136527..136922 (+)	396	WP_044678997.1	single-stranded DNA-binding protein	Machinery gene
PW220_RS00840 (PW220_00840)	-	137042..137287 (-)	246	WP_248044479.1	hypothetical protein	-
PW220_RS00845 (PW220_00845)	groES	137483..137764 (+)	282	WP_105110716.1	co-chaperone GroES	-
PW220_RS00850 (PW220_00850)	-	137773..138123 (+)	351	WP_205033281.1	hypothetical protein	-
PW220_RS00855 (PW220_00855)	groL	138164..139786 (+)	1623	WP_044772870.1	chaperonin GroEL	-
PW220_RS00860 (PW220_00860)	rpsL	140017..140430 (+)	414	WP_002940030.1	30S ribosomal protein S12	-
PW220_RS00865 (PW220_00865)	rpsG	140447..140917 (+)	471	WP_002940031.1	30S ribosomal protein S7	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14868.73 Da
• Isoelectric Point: 5.0026

>NTDB_id=794671 PW220_RS00835 WP_044678997.1 136527..136922(+) (ssbA) [Streptococcus iners subsp. hyiners strain 29892]
MYNKTILIGRLTAQPELTQTPTGKNLTRVTVAVNRRFKTENGEREADFLNVIFWGKLAETLVSYGSKGSLISIDGELRTR
KYEKDGSNHYVTEILGNTFQLLESRAQRAMRENNTGDDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=794671 PW220_RS00835 WP_044678997.1 136527..136922(+) (ssbA) [Streptococcus iners subsp. hyiners strain 29892]
ATGTATAATAAAACAATTTTAATCGGTCGCTTGACGGCCCAACCTGAACTCACTCAAACACCAACTGGTAAAAATTTGAC
TCGTGTTACTGTTGCAGTTAATCGACGATTTAAGACAGAAAATGGCGAACGTGAAGCAGATTTTCTTAATGTCATTTTCT
GGGGCAAACTGGCGGAGACACTTGTTTCTTATGGCAGCAAGGGCAGTCTGATTTCTATTGACGGTGAGTTGCGAACGCGA
AAATACGAAAAAGACGGCAGCAACCACTATGTGACGGAAATCTTGGGCAATACCTTCCAGTTGCTTGAAAGTCGCGCCCA
ACGTGCCATGCGTGAAAATAACACAGGCGATGACCTAGCTGACTTGGTCTTGGAAGAGGAGGAATTACCGTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

3D structure

• AlphaFold DB: A0A0Z8JN20

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	75.573	100	0.756
ssbB	Streptococcus sobrinus strain NIDR 6715-7	74.046	100	0.74
ssbB/cilA	Streptococcus pneumoniae TIGR4	71.756	100	0.718
ssbB/cilA	Streptococcus pneumoniae Rx1	70.992	100	0.71
ssbB/cilA	Streptococcus pneumoniae D39	70.992	100	0.71
ssbB/cilA	Streptococcus pneumoniae R6	70.992	100	0.71
ssbB/cilA	Streptococcus mitis NCTC 12261	70.992	100	0.71
ssbB/cilA	Streptococcus mitis SK321	70.992	100	0.71
ssbB	Lactococcus lactis subsp. cremoris KW2	63.393	85.496	0.542
ssb	Latilactobacillus sakei subsp. sakei 23K	44.248	86.26	0.382
ssbA	Bacillus subtilis subsp. subtilis str. 168	45.283	80.916	0.366