Detailed information NTG0792040

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PVZ93_RS11095
• Genome accession: NZ_CP118347
• Coordinates: 2295321..2296424 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA13
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2290321..2301424

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PVZ93_RS11070 (PVZ93_11085)	-	2290357..2291307 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
PVZ93_RS11075 (PVZ93_11090)	-	2291301..2291786 (+)	486	Protein_2176	phosphonate ABC transporter ATP-binding protein	-
PVZ93_RS11080 (PVZ93_11095)	phnE	2291804..2292673 (+)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PVZ93_RS11085 (PVZ93_11100)	phnE	2292670..2293491 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PVZ93_RS11090 (PVZ93_11110)	-	2293676..2295274 (+)	1599	Protein_2179	CYTH and CHAD domain-containing protein	-
PVZ93_RS11095 (PVZ93_11115)	pilA	2295321..2296424 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PVZ93_RS11100 (PVZ93_11120)	rsmD	2296500..2297120 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PVZ93_RS11105 (PVZ93_11125)	coaD	2297141..2297650 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PVZ93_RS11110 (PVZ93_11130)	-	2297705..2297956 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PVZ93_RS11115 (PVZ93_11135)	-	2298020..2299153 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PVZ93_RS11120 (PVZ93_11140)	-	2299161..2299547 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792040 PVZ93_RS11095 WP_023853086.1 2295321..2296424(-) (pilA) [Bordetella pertussis strain SA13]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792040 PVZ93_RS11095 WP_023853086.1 2295321..2296424(-) (pilA) [Bordetella pertussis strain SA13]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507