Detailed information NTG0783420

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: MGCS35823_RS00800
• Genome accession: NZ_CP117289
• Coordinates: 128740..129066 (+)
• Length: 108 a.a.
• NCBI ID: WP_084916953.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain MGCS35823
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 123740..134066

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MGCS35823_RS00785 (MGCS35823_00320)	-	126384..126749 (+)	366	WP_003055257.1	DUF1033 family protein	-
MGCS35823_RS00790 (MGCS35823_00322)	comGA/cglA	126830..127771 (+)	942	WP_014611930.1	competence type IV pilus ATPase ComGA	Machinery gene
MGCS35823_RS00795 (MGCS35823_00324)	comYB	127707..128738 (+)	1032	WP_084916952.1	competence type IV pilus assembly protein ComGB	Machinery gene
MGCS35823_RS00800 (MGCS35823_00326)	comYC	128740..129066 (+)	327	WP_084916953.1	competence type IV pilus major pilin ComGC	Machinery gene
MGCS35823_RS00805 (MGCS35823_00328)	comGD	129041..129469 (+)	429	WP_275910579.1	competence type IV pilus minor pilin ComGD	-
MGCS35823_RS00810 (MGCS35823_00330)	comGE	129426..129722 (+)	297	WP_080982572.1	competence type IV pilus minor pilin ComGE	-
MGCS35823_RS00815 (MGCS35823_00332)	comGF	129703..130143 (+)	441	WP_003061780.1	competence type IV pilus minor pilin ComGF	-
MGCS35823_RS00820 (MGCS35823_00334)	comGG	130172..130495 (+)	324	WP_227985720.1	competence type IV pilus minor pilin ComGG	-
MGCS35823_RS00825 (MGCS35823_00336)	comYH	130558..131511 (+)	954	WP_003060701.1	class I SAM-dependent methyltransferase	Machinery gene
MGCS35823_RS00830 (MGCS35823_00338)	-	131570..132766 (+)	1197	WP_084916957.1	acetate kinase	-
MGCS35823_RS00835 (MGCS35823_00340)	-	133073..133279 (+)	207	WP_003058508.1	helix-turn-helix transcriptional regulator	-
MGCS35823_RS00840 (MGCS35823_00342)	-	133382..134062 (+)	681	WP_003060329.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12439.42 Da
• Isoelectric Point: 9.2972

>NTDB_id=783420 MGCS35823_RS00800 WP_084916953.1 128740..129066(+) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35823]
MKNQWKPLRQYQLQAFTLLEMLLVILVISVLMLLFVPNLSKQKDRVTETGNAAVVKLVENQAELYELSQGSKPSLQQLKD
DGSITDKQVKAYTDYYGKHRDETQKLQP

Nucleotide

• Length: 327 bp

>NTDB_id=783420 MGCS35823_RS00800 WP_084916953.1 128740..129066(+) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35823]
ATGAAAAACCAATGGAAACCATTACGGCAATACCAACTACAAGCTTTCACACTTCTAGAAATGTTACTGGTGATTTTAGT
CATCAGTGTCTTAATGCTCTTATTTGTACCTAATTTAAGCAAACAAAAAGATAGGGTTACCGAAACAGGAAATGCTGCTG
TTGTCAAATTAGTGGAGAATCAAGCAGAGTTGTACGAATTATCGCAAGGATCAAAACCAAGTTTACAACAGTTGAAAGAC
GATGGCAGTATTACAGATAAACAGGTAAAAGCTTACACAGACTATTATGGAAAACACAGAGATGAAACTCAAAAACTACA
ACCTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	58.095	97.222	0.565
comGC/cglC	Streptococcus mitis SK321	52.83	98.148	0.519
comGC/cglC	Streptococcus pneumoniae D39	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae R6	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae Rx1	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae TIGR4	51.402	99.074	0.509
comGC	Lactococcus lactis subsp. cremoris KW2	53.398	95.37	0.509
comGC/cglC	Streptococcus mitis NCTC 12261	55.102	90.741	0.5
comYC	Streptococcus mutans UA140	52.475	93.519	0.491
comYC	Streptococcus mutans UA159	52.475	93.519	0.491
comYC	Streptococcus suis isolate S10	50.562	82.407	0.417