Detailed information NTG0755985

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: BBP27_RS02035
• Genome accession: NZ_CP110721
• Coordinates: 436421..437551 (-)
• Length: 376 a.a.
• NCBI ID: WP_188212164.1
• Uniprot ID: -
• Organism: Neisseria sp. RH3002v2g
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 431421..442551

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BBP27_RS02015	mutM	432078..432905 (+)	828	WP_188212167.1	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	-
BBP27_RS02020	-	432970..433755 (+)	786	WP_188212166.1	1-acylglycerol-3-phosphate O-acyltransferase	-
BBP27_RS02025	-	433944..434681 (+)	738	WP_137040954.1	redoxin family protein	-
BBP27_RS02030	-	434935..436341 (+)	1407	WP_188212165.1	dihydrolipoyl dehydrogenase	-
BBP27_RS02035	pilU	436421..437551 (-)	1131	WP_188212164.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
BBP27_RS02040	-	437755..438456 (+)	702	WP_188212163.1	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	-
BBP27_RS02045	lepA	438589..440382 (+)	1794	WP_049348368.1	translation elongation factor 4	-
BBP27_RS02050	lepB	440382..441401 (+)	1020	WP_188212162.1	signal peptidase I	-
BBP27_RS02055	-	441456..442334 (-)	879	WP_188212161.1	DMT family transporter	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 42419.54 Da
• Isoelectric Point: 5.9015

>NTDB_id=755985 BBP27_RS02035 WP_188212164.1 436421..437551(-) (pilU) [Neisseria sp. RH3002v2g]
MFDENTPGAKEELFAWLRHMNKYKGSDLFITTNFPPAMKVDGKIIRLTDEPLSAEKCMEIAFSIMSSKQIEEFSTTNECN
FAISLPDTSRFRVNAMVQRGSTALVFRSITSNIPKFETLNLPPILKDIALRKRGLVIFVGGTGSGKSTSLASLIDYRNEN
SFDHIITIEDPIEFIHQHKNCIITQREIGVDTENWPIALKNTLRQAPDVILIGEIRDRETMDYAISFAETGHLCMATLHA
NSTNQALDRIINFFPEERRNQLLTDLSLNLQAFISQRLIPREGGRGRVAAVEVLLNSPIIADLIRKGEVHNIKEMMKKST
GMGMITFDQALYDLYENGDISYQDAIKNADSAHDLRLDIQLRSRRAQNAGPDLELI

Nucleotide

• Length: 1131 bp

>NTDB_id=755985 BBP27_RS02035 WP_188212164.1 436421..437551(-) (pilU) [Neisseria sp. RH3002v2g]
ATGTTTGACGAAAATACTCCGGGCGCAAAAGAAGAATTGTTCGCTTGGCTACGCCATATGAACAAATACAAAGGCTCCGA
CCTTTTCATTACCACCAACTTCCCGCCGGCCATGAAAGTGGACGGCAAAATCATACGGCTGACCGATGAGCCGTTAAGCG
CTGAAAAATGTATGGAAATCGCTTTTTCGATTATGTCTTCCAAACAAATCGAAGAATTTTCTACCACCAATGAATGCAAT
TTCGCCATCAGCCTGCCCGACACCAGCCGCTTCCGTGTCAATGCAATGGTTCAACGCGGCTCAACTGCATTAGTGTTCCG
CTCCATTACCAGCAATATCCCTAAATTTGAAACGCTCAATCTGCCACCGATTCTGAAAGACATCGCCCTCAGAAAACGCG
GTTTGGTTATTTTTGTCGGCGGTACAGGTTCGGGCAAGTCCACTTCCCTCGCCTCCCTTATCGACTATCGAAACGAAAAC
AGCTTCGACCACATTATTACCATCGAAGACCCGATTGAGTTTATCCACCAACACAAAAACTGCATCATCACCCAACGTGA
AATCGGTGTAGATACAGAAAATTGGCCGATTGCATTGAAAAATACCCTGCGCCAAGCGCCGGATGTTATCCTGATTGGTG
AAATCCGAGACCGCGAGACCATGGACTACGCCATTTCCTTTGCGGAAACCGGCCATTTGTGTATGGCGACACTGCACGCC
AACAGTACCAACCAAGCGCTGGACCGCATCATCAACTTCTTCCCCGAAGAGCGCCGTAACCAGTTGCTAACCGATTTATC
GCTCAACCTGCAAGCCTTTATTTCGCAACGCCTGATTCCCCGCGAAGGCGGACGGGGACGCGTAGCGGCTGTCGAGGTTT
TGCTCAATTCGCCCATTATTGCCGACTTAATCCGAAAAGGCGAAGTCCACAACATCAAAGAAATGATGAAAAAATCAACC
GGCATGGGCATGATTACTTTTGACCAAGCCTTGTATGATTTGTATGAGAACGGCGATATCAGCTATCAAGACGCTATTAA
AAATGCCGACTCCGCACACGATTTGCGCCTAGACATTCAATTAAGAAGCCGTCGCGCACAAAATGCCGGTCCGGATTTAG
AATTGATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (44-259)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	61.08	93.617	0.572
pilU	Acinetobacter baylyi ADP1	57.726	91.223	0.527
pilU	Vibrio cholerae strain A1552	53.482	95.479	0.511
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.844	88.564	0.388
pilT	Acinetobacter baumannii D1279779	43.519	86.17	0.375
pilT	Acinetobacter nosocomialis M2	43.519	86.17	0.375
pilT	Acinetobacter baumannii strain A118	43.519	86.17	0.375
pilT	Acinetobacter baylyi ADP1	42.378	87.234	0.37
pilT	Legionella pneumophila strain Lp02	42.593	86.17	0.367
pilT	Legionella pneumophila strain ERS1305867	42.593	86.17	0.367