Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SAGCMC97051_RS01620 | Genome accession | NZ_AP020310 |
| Coordinates | 255498..255893 (+) | Length | 131 a.a. |
| NCBI ID | WP_000282447.1 | Uniprot ID | A0AAV3JLT6 |
| Organism | Streptococcus agalactiae strain GCMC97051 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 250498..260893
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAGCMC97051_RS01585 (SAGCMC97051_02580) | proC | 250892..251662 (-) | 771 | WP_001865901.1 | pyrroline-5-carboxylate reductase | - |
| SAGCMC97051_RS01590 (SAGCMC97051_02590) | pepA | 251732..252799 (-) | 1068 | WP_001281323.1 | glutamyl aminopeptidase | - |
| SAGCMC97051_RS01595 (SAGCMC97051_02600) | - | 252984..253223 (-) | 240 | WP_000660180.1 | hypothetical protein | - |
| SAGCMC97051_RS01600 (SAGCMC97051_02610) | - | 253384..253668 (+) | 285 | WP_000791272.1 | DUF4651 domain-containing protein | - |
| SAGCMC97051_RS01605 (SAGCMC97051_02620) | - | 253665..253988 (+) | 324 | WP_000602781.1 | thioredoxin family protein | - |
| SAGCMC97051_RS01610 (SAGCMC97051_02630) | ytpR | 254021..254647 (+) | 627 | WP_000578328.1 | YtpR family tRNA-binding protein | - |
| SAGCMC97051_RS01615 (SAGCMC97051_02640) | - | 254701..255417 (-) | 717 | WP_000186185.1 | class I SAM-dependent methyltransferase | - |
| SAGCMC97051_RS01620 (SAGCMC97051_02650) | ssbA | 255498..255893 (+) | 396 | WP_000282447.1 | single-stranded DNA-binding protein | Machinery gene |
| SAGCMC97051_RS01625 (SAGCMC97051_02660) | - | 256017..256661 (+) | 645 | WP_000416612.1 | HAD family hydrolase | - |
| SAGCMC97051_RS01630 (SAGCMC97051_02670) | - | 256688..258433 (+) | 1746 | WP_237395035.1 | LytS/YhcK type 5TM receptor domain-containing protein | - |
| SAGCMC97051_RS01635 | - | 258414..258488 (+) | 75 | Protein_268 | DNA-binding response regulator | - |
| SAGCMC97051_RS01640 (SAGCMC97051_02690) | - | 258576..259709 (+) | 1134 | WP_000564846.1 | ISAs1-like element IS1548 family transposase | - |
| SAGCMC97051_RS01650 (SAGCMC97051_02700) | - | 259766..260479 (+) | 714 | WP_237395036.1 | LytTR family transcriptional regulator DNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14774.80 Da Isoelectric Point: 7.0189
>NTDB_id=74531 SAGCMC97051_RS01620 WP_000282447.1 255498..255893(+) (ssbA) [Streptococcus agalactiae strain GCMC97051]
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=74531 SAGCMC97051_RS01620 WP_000282447.1 255498..255893(+) (ssbA) [Streptococcus agalactiae strain GCMC97051]
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTGAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGCTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAACGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTGAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGCTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAACGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
80.916 |
100 |
0.809 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
77.099 |
100 |
0.771 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
77.099 |
100 |
0.771 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
76.336 |
100 |
0.763 |
| ssbB/cilA | Streptococcus mitis SK321 |
76.336 |
100 |
0.763 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
60.526 |
87.023 |
0.527 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.018 |
86.26 |
0.397 |