Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | SAP2_RS06590 | Genome accession | NZ_AP019698 |
| Coordinates | 1369096..1369404 (+) | Length | 102 a.a. |
| NCBI ID | WP_103387866.1 | Uniprot ID | - |
| Organism | Staphylococcus arlettae strain P2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1364096..1374404
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAP2_RS06560 (SAP2_13010) | - | 1364426..1364620 (+) | 195 | WP_142019637.1 | YqgQ family protein | - |
| SAP2_RS06565 (SAP2_13020) | - | 1365085..1366071 (+) | 987 | WP_002509762.1 | glucokinase | - |
| SAP2_RS06570 (SAP2_13030) | - | 1366071..1366409 (+) | 339 | WP_002509761.1 | MTH1187 family thiamine-binding protein | - |
| SAP2_RS06575 (SAP2_13040) | - | 1366396..1367013 (+) | 618 | WP_002509760.1 | MBL fold metallo-hydrolase | - |
| SAP2_RS06580 (SAP2_13050) | comGA | 1367066..1368040 (+) | 975 | WP_142019638.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SAP2_RS06585 (SAP2_13060) | comGB | 1368012..1369064 (+) | 1053 | WP_002509758.1 | competence type IV pilus assembly protein ComGB | - |
| SAP2_RS06590 (SAP2_13070) | comGC | 1369096..1369404 (+) | 309 | WP_103387866.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SAP2_RS06595 (SAP2_13080) | - | 1369427..1369831 (+) | 405 | WP_232190723.1 | competence protein | - |
| SAP2_RS06600 (SAP2_13090) | - | 1369812..1370111 (+) | 300 | WP_002509755.1 | hypothetical protein | - |
| SAP2_RS06605 (SAP2_13100) | - | 1370086..1370514 (+) | 429 | WP_142019639.1 | competence type IV pilus minor pilin ComGF | - |
| SAP2_RS06610 (SAP2_13120) | - | 1370682..1371194 (+) | 513 | WP_002509752.1 | shikimate kinase | - |
| SAP2_RS06615 (SAP2_13130) | gcvT | 1371362..1372453 (+) | 1092 | WP_021459931.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SAP2_RS06620 (SAP2_13140) | gcvPA | 1372472..1373824 (+) | 1353 | WP_002509750.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 11303.35 Da Isoelectric Point: 9.5423
>NTDB_id=73316 SAP2_RS06590 WP_103387866.1 1369096..1369404(+) (comGC) [Staphylococcus arlettae strain P2]
MYKRTVTKAFTLIEMLLVLLIISLLLILIIPNIAKQSKHIQNTGCKAQLKMVDSQIEAYTLKNNQAPATIDDLVREGYIK
ENQKQCKSGANITITNGEAVAS
MYKRTVTKAFTLIEMLLVLLIISLLLILIIPNIAKQSKHIQNTGCKAQLKMVDSQIEAYTLKNNQAPATIDDLVREGYIK
ENQKQCKSGANITITNGEAVAS
Nucleotide
Download Length: 309 bp
>NTDB_id=73316 SAP2_RS06590 WP_103387866.1 1369096..1369404(+) (comGC) [Staphylococcus arlettae strain P2]
ATGTATAAAAGAACTGTTACAAAAGCTTTTACATTAATAGAAATGTTACTCGTACTATTAATCATTAGTTTATTACTCAT
ACTAATAATCCCTAATATTGCAAAACAATCAAAGCATATACAAAATACAGGTTGTAAAGCACAATTAAAAATGGTCGATA
GCCAAATAGAAGCATACACATTAAAAAATAATCAAGCACCAGCAACAATAGATGACCTTGTTCGAGAGGGGTATATTAAA
GAGAATCAAAAACAATGTAAATCCGGTGCAAATATTACAATTACTAATGGTGAAGCTGTTGCTAGCTAG
ATGTATAAAAGAACTGTTACAAAAGCTTTTACATTAATAGAAATGTTACTCGTACTATTAATCATTAGTTTATTACTCAT
ACTAATAATCCCTAATATTGCAAAACAATCAAAGCATATACAAAATACAGGTTGTAAAGCACAATTAAAAATGGTCGATA
GCCAAATAGAAGCATACACATTAAAAAATAATCAAGCACCAGCAACAATAGATGACCTTGTTCGAGAGGGGTATATTAAA
GAGAATCAAAAACAATGTAAATCCGGTGCAAATATTACAATTACTAATGGTGAAGCTGTTGCTAGCTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus N315 |
75 |
94.118 |
0.706 |
| comGC | Staphylococcus aureus MW2 |
75 |
94.118 |
0.706 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
50 |
84.314 |
0.422 |
| comYC | Streptococcus mutans UA140 |
50.617 |
79.412 |
0.402 |
| comYC | Streptococcus mutans UA159 |
50.617 |
79.412 |
0.402 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
43.956 |
89.216 |
0.392 |
| comYC | Streptococcus suis isolate S10 |
51.316 |
74.51 |
0.382 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
46.914 |
79.412 |
0.373 |
| comGC/cglC | Streptococcus mitis SK321 |
45.238 |
82.353 |
0.373 |
| comGC/cglC | Streptococcus pneumoniae R6 |
44.048 |
82.353 |
0.363 |
| comGC/cglC | Streptococcus pneumoniae D39 |
44.048 |
82.353 |
0.363 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
44.048 |
82.353 |
0.363 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
44.048 |
82.353 |
0.363 |