Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | SAP2_RS06580 | Genome accession | NZ_AP019698 |
| Coordinates | 1367066..1368040 (+) | Length | 324 a.a. |
| NCBI ID | WP_142019638.1 | Uniprot ID | - |
| Organism | Staphylococcus arlettae strain P2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1362066..1373040
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAP2_RS06545 (SAP2_12980) | rpmG | 1362157..1362306 (+) | 150 | WP_002509766.1 | 50S ribosomal protein L33 | - |
| SAP2_RS06550 (SAP2_12990) | - | 1362431..1362970 (+) | 540 | WP_021459927.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| SAP2_RS06555 (SAP2_13000) | - | 1362982..1364424 (+) | 1443 | WP_142019636.1 | rhomboid family intramembrane serine protease | - |
| SAP2_RS06560 (SAP2_13010) | - | 1364426..1364620 (+) | 195 | WP_142019637.1 | YqgQ family protein | - |
| SAP2_RS06565 (SAP2_13020) | - | 1365085..1366071 (+) | 987 | WP_002509762.1 | glucokinase | - |
| SAP2_RS06570 (SAP2_13030) | - | 1366071..1366409 (+) | 339 | WP_002509761.1 | MTH1187 family thiamine-binding protein | - |
| SAP2_RS06575 (SAP2_13040) | - | 1366396..1367013 (+) | 618 | WP_002509760.1 | MBL fold metallo-hydrolase | - |
| SAP2_RS06580 (SAP2_13050) | comGA | 1367066..1368040 (+) | 975 | WP_142019638.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SAP2_RS06585 (SAP2_13060) | comGB | 1368012..1369064 (+) | 1053 | WP_002509758.1 | competence type IV pilus assembly protein ComGB | - |
| SAP2_RS06590 (SAP2_13070) | comGC | 1369096..1369404 (+) | 309 | WP_103387866.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SAP2_RS06595 (SAP2_13080) | - | 1369427..1369831 (+) | 405 | WP_232190723.1 | competence protein | - |
| SAP2_RS06600 (SAP2_13090) | - | 1369812..1370111 (+) | 300 | WP_002509755.1 | hypothetical protein | - |
| SAP2_RS06605 (SAP2_13100) | - | 1370086..1370514 (+) | 429 | WP_142019639.1 | competence type IV pilus minor pilin ComGF | - |
| SAP2_RS06610 (SAP2_13120) | - | 1370682..1371194 (+) | 513 | WP_002509752.1 | shikimate kinase | - |
| SAP2_RS06615 (SAP2_13130) | gcvT | 1371362..1372453 (+) | 1092 | WP_021459931.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37369.35 Da Isoelectric Point: 7.7750
>NTDB_id=73315 SAP2_RS06580 WP_142019638.1 1367066..1368040(+) (comGA) [Staphylococcus arlettae strain P2]
MKLLFEDIMTKAIKQKTSDIHFIPVENEVVIKLRVNESLIDFQKMTKHTYAKLLTYMKYQACLDVSTHHIAQSGRYIYNY
KQLYYLRISTLPLSLGIESCVIRIIPQYFYQSTEEMQLDYLYHLMTKKQGLVLFTGPTGSGKSTSMYQMSLYAKEQLNLN
VITIEDPVERIIDGITQISVNTKAGIDYHNSFKAILRCDPDVILIGEIRNAEIAKQVIHASLSGHLVLTTLHANSCEGAL
LRLLEMGLTNQELVQTIINITNQRLITSNDKHRYLVAESLSYEDIHYFFNNNYRLPEDFQTLPNILQRLSQKGVICEKVV
QKYI
MKLLFEDIMTKAIKQKTSDIHFIPVENEVVIKLRVNESLIDFQKMTKHTYAKLLTYMKYQACLDVSTHHIAQSGRYIYNY
KQLYYLRISTLPLSLGIESCVIRIIPQYFYQSTEEMQLDYLYHLMTKKQGLVLFTGPTGSGKSTSMYQMSLYAKEQLNLN
VITIEDPVERIIDGITQISVNTKAGIDYHNSFKAILRCDPDVILIGEIRNAEIAKQVIHASLSGHLVLTTLHANSCEGAL
LRLLEMGLTNQELVQTIINITNQRLITSNDKHRYLVAESLSYEDIHYFFNNNYRLPEDFQTLPNILQRLSQKGVICEKVV
QKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=73315 SAP2_RS06580 WP_142019638.1 1367066..1368040(+) (comGA) [Staphylococcus arlettae strain P2]
TTGAAATTGTTATTTGAAGATATTATGACCAAGGCCATCAAACAGAAAACGTCTGATATTCATTTTATACCAGTCGAAAA
TGAAGTAGTTATTAAATTGCGGGTGAATGAAAGTTTAATAGATTTTCAAAAAATGACTAAGCATACCTATGCTAAACTTT
TAACTTATATGAAATATCAAGCATGCCTAGATGTTTCTACACACCACATTGCACAAAGTGGCCGTTATATTTATAACTAT
AAGCAGTTATATTACTTACGTATTTCCACGTTGCCGTTATCATTAGGAATTGAAAGCTGTGTTATTAGAATAATTCCACA
ATACTTCTACCAATCAACTGAAGAAATGCAATTGGATTATTTATATCATTTAATGACGAAAAAACAAGGCTTGGTGTTAT
TCACAGGTCCAACAGGCTCGGGGAAAAGTACATCAATGTATCAAATGAGTTTGTATGCAAAAGAACAATTAAATTTAAAT
GTGATTACTATTGAAGACCCAGTTGAAAGAATTATAGATGGTATTACGCAAATTTCGGTAAACACTAAAGCTGGCATTGA
CTATCACAATTCTTTTAAAGCTATTTTAAGATGCGATCCAGACGTAATCTTAATTGGTGAAATAAGAAATGCTGAAATAG
CTAAACAAGTCATACACGCGAGTTTAAGTGGACATCTTGTTTTGACAACATTACATGCCAATAGTTGTGAAGGGGCATTA
CTTCGTTTATTAGAAATGGGGCTCACAAATCAGGAATTAGTACAAACTATTATTAATATTACTAACCAACGACTCATTAC
TTCTAATGACAAGCATCGATATTTAGTAGCAGAAAGCTTATCATATGAAGATATACATTACTTCTTTAACAATAATTATA
GACTACCAGAAGATTTCCAAACTTTGCCGAATATATTACAACGATTATCGCAAAAGGGGGTTATTTGTGAAAAAGTGGTA
CAAAAATACATTTAA
TTGAAATTGTTATTTGAAGATATTATGACCAAGGCCATCAAACAGAAAACGTCTGATATTCATTTTATACCAGTCGAAAA
TGAAGTAGTTATTAAATTGCGGGTGAATGAAAGTTTAATAGATTTTCAAAAAATGACTAAGCATACCTATGCTAAACTTT
TAACTTATATGAAATATCAAGCATGCCTAGATGTTTCTACACACCACATTGCACAAAGTGGCCGTTATATTTATAACTAT
AAGCAGTTATATTACTTACGTATTTCCACGTTGCCGTTATCATTAGGAATTGAAAGCTGTGTTATTAGAATAATTCCACA
ATACTTCTACCAATCAACTGAAGAAATGCAATTGGATTATTTATATCATTTAATGACGAAAAAACAAGGCTTGGTGTTAT
TCACAGGTCCAACAGGCTCGGGGAAAAGTACATCAATGTATCAAATGAGTTTGTATGCAAAAGAACAATTAAATTTAAAT
GTGATTACTATTGAAGACCCAGTTGAAAGAATTATAGATGGTATTACGCAAATTTCGGTAAACACTAAAGCTGGCATTGA
CTATCACAATTCTTTTAAAGCTATTTTAAGATGCGATCCAGACGTAATCTTAATTGGTGAAATAAGAAATGCTGAAATAG
CTAAACAAGTCATACACGCGAGTTTAAGTGGACATCTTGTTTTGACAACATTACATGCCAATAGTTGTGAAGGGGCATTA
CTTCGTTTATTAGAAATGGGGCTCACAAATCAGGAATTAGTACAAACTATTATTAATATTACTAACCAACGACTCATTAC
TTCTAATGACAAGCATCGATATTTAGTAGCAGAAAGCTTATCATATGAAGATATACATTACTTCTTTAACAATAATTATA
GACTACCAGAAGATTTCCAAACTTTGCCGAATATATTACAACGATTATCGCAAAAGGGGGTTATTTGTGAAAAAGTGGTA
CAAAAATACATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
61.111 |
100 |
0.611 |
| comGA | Staphylococcus aureus N315 |
61.111 |
100 |
0.611 |