Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | GZN30_RS08190 | Genome accession | NZ_AP019657 |
| Coordinates | 1885263..1885562 (-) | Length | 99 a.a. |
| NCBI ID | WP_075651323.1 | Uniprot ID | A0A3N3E395 |
| Organism | Vibrio ponticus strain DSM 16217 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1880263..1890562
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZN30_RS08170 | - | 1881027..1881683 (-) | 657 | WP_075651331.1 | ABC transporter permease | - |
| GZN30_RS08175 | ihfB | 1882104..1882385 (-) | 282 | WP_075651329.1 | integration host factor subunit beta | - |
| GZN30_RS08180 | rpsA | 1882588..1884246 (-) | 1659 | WP_075651327.1 | 30S ribosomal protein S1 | - |
| GZN30_RS08185 | cmk | 1884355..1885035 (-) | 681 | WP_075651325.1 | (d)CMP kinase | - |
| GZN30_RS08190 | comEA | 1885263..1885562 (-) | 300 | WP_075651323.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| GZN30_RS08195 | ppiD | 1885699..1887558 (-) | 1860 | WP_075651321.1 | peptidylprolyl isomerase | - |
| GZN30_RS08200 | - | 1887734..1888006 (-) | 273 | WP_075651319.1 | HU family DNA-binding protein | - |
| GZN30_RS08205 | lon | 1888201..1890552 (-) | 2352 | WP_075651317.1 | endopeptidase La | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10798.68 Da Isoelectric Point: 9.5409
>NTDB_id=73116 GZN30_RS08190 WP_075651323.1 1885263..1885562(-) (comEA) [Vibrio ponticus strain DSM 16217]
MKMKSLLITLLLVLTSTFAVASDQDVKDPKYDGIEIVVNVNQASAQEIADMLKGIGLKKAQAIVEYRQQQGPFKQVEDLA
KVQGIGEATVAKNIARIKL
MKMKSLLITLLLVLTSTFAVASDQDVKDPKYDGIEIVVNVNQASAQEIADMLKGIGLKKAQAIVEYRQQQGPFKQVEDLA
KVQGIGEATVAKNIARIKL
Nucleotide
Download Length: 300 bp
>NTDB_id=73116 GZN30_RS08190 WP_075651323.1 1885263..1885562(-) (comEA) [Vibrio ponticus strain DSM 16217]
ATGAAAATGAAATCTTTACTAATAACACTATTGCTTGTACTCACCTCTACGTTTGCTGTGGCATCGGATCAAGACGTCAA
AGATCCCAAATATGATGGGATTGAGATAGTGGTCAACGTTAATCAAGCTTCTGCGCAAGAGATTGCCGATATGCTCAAAG
GTATCGGTCTAAAAAAGGCGCAAGCAATCGTTGAGTACCGCCAGCAGCAAGGTCCTTTTAAACAGGTCGAAGACCTGGCT
AAGGTGCAGGGTATCGGTGAAGCTACGGTGGCAAAAAATATCGCCAGAATAAAACTGTAG
ATGAAAATGAAATCTTTACTAATAACACTATTGCTTGTACTCACCTCTACGTTTGCTGTGGCATCGGATCAAGACGTCAA
AGATCCCAAATATGATGGGATTGAGATAGTGGTCAACGTTAATCAAGCTTCTGCGCAAGAGATTGCCGATATGCTCAAAG
GTATCGGTCTAAAAAAGGCGCAAGCAATCGTTGAGTACCGCCAGCAGCAAGGTCCTTTTAAACAGGTCGAAGACCTGGCT
AAGGTGCAGGGTATCGGTGAAGCTACGGTGGCAAAAAATATCGCCAGAATAAAACTGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
57.732 |
97.98 |
0.566 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
57.447 |
94.949 |
0.545 |
| comEA | Vibrio cholerae C6706 |
50.485 |
100 |
0.525 |
| comEA | Vibrio cholerae strain A1552 |
50.485 |
100 |
0.525 |
| comEA | Acinetobacter baylyi ADP1 |
46.25 |
80.808 |
0.374 |
| comE | Neisseria gonorrhoeae MS11 |
41.111 |
90.909 |
0.374 |
| comE | Neisseria gonorrhoeae MS11 |
41.111 |
90.909 |
0.374 |
| comE | Neisseria gonorrhoeae MS11 |
41.111 |
90.909 |
0.374 |
| comE | Neisseria gonorrhoeae MS11 |
41.111 |
90.909 |
0.374 |
| comEA | Legionella pneumophila str. Paris |
36.364 |
100 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.364 |
100 |
0.364 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.158 |
57.576 |
0.364 |