Detailed information NTG0722848

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NX050_RS01985
• Genome accession: NZ_CP103456
• Coordinates: 388198..389343 (-)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PN176 (HK176)
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 383198..394343

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NX050_RS01960 (NX050_01960)	pbpG	383465..385540 (-)	2076	WP_014481227.1	transglycosylase domain-containing protein	-
NX050_RS01965 (NX050_01965)	speE	385742..386572 (+)	831	WP_003227543.1	spermidine synthase	-
NX050_RS01970 (NX050_01970)	speB	386633..387505 (+)	873	WP_003227545.1	agmatinase	-
NX050_RS01975 (NX050_01975)	-	387570..387997 (-)	428	Protein_393	YbaK/EbsC family protein	-
NX050_RS01980 (NX050_01980)	phrF	388095..388214 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
NX050_RS01985 (NX050_01985)	rapF	388198..389343 (-)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
NX050_RS22475	-	389346..389576 (+)	231	Protein_396	hypothetical protein	-
NX050_RS01990 (NX050_01990)	ywhK	389573..390928 (+)	1356	WP_014481224.1	YncE family protein	-
NX050_RS01995 (NX050_01995)	ywhL	390967..392343 (+)	1377	WP_014481223.1	YncE family protein	-
NX050_RS02000 (NX050_02000)	albG	392349..393050 (-)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NX050_RS02005 (NX050_02005)	albF	393047..394327 (-)	1281	WP_014481221.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=722848 NX050_RS01985 WP_014481226.1 388198..389343(-) (rapF) [Bacillus subtilis strain PN176 (HK176)]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=722848 NX050_RS01985 WP_014481226.1 388198..389343(-) (rapF) [Bacillus subtilis strain PN176 (HK176)]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572