Detailed information NTG0071824

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EL277_RS10560
• Genome accession: NZ_AP018936
• Coordinates: 1972596..1973000 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588028.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain NU83127
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1967596..1978000

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL277_RS10525 (SPNU_1988)	rnpA	1968010..1968381 (-)	372	WP_000739253.1	ribonuclease P protein component	-
EL277_RS12635	-	1968398..1968529 (-)	132	WP_000768904.1	hypothetical protein	-
EL277_RS10530 (SPNU_1989)	-	1968530..1969720 (-)	1191	WP_000167757.1	acetate kinase	-
EL277_RS10535 (SPNU_1990)	comYH	1969771..1970724 (-)	954	WP_000345135.1	class I SAM-dependent methyltransferase	Machinery gene
EL277_RS10540	-	1970785..1971379 (-)	595	Protein_1954	class I SAM-dependent methyltransferase	-
EL277_RS10545 (SPNU_1993)	comGG/cglG	1971516..1971929 (-)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
EL277_RS10550 (SPNU_1994)	comGF/cglF	1971907..1972368 (-)	462	WP_000250534.1	competence type IV pilus minor pilin ComGF	Machinery gene
EL277_RS10555 (SPNU_1995)	comGE/cglE	1972331..1972633 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EL277_RS10560 (SPNU_1996)	comGD/cglD	1972596..1973000 (-)	405	WP_000588028.1	competence type IV pilus minor pilin ComGD	Machinery gene
EL277_RS10565 (SPNU_1997)	comGC/cglC	1972993..1973319 (-)	327	WP_000738627.1	comG operon protein ComGC	Machinery gene
EL277_RS10570 (SPNU_1998)	comGB/cglB	1973321..1974337 (-)	1017	WP_074196785.1	competence type IV pilus assembly protein ComGB	Machinery gene
EL277_RS10575 (SPNU_1999)	comGA/cglA/cilD	1974285..1975226 (-)	942	WP_000249564.1	competence type IV pilus ATPase ComGA	Machinery gene
EL277_RS10580 (SPNU_2000)	-	1975302..1975667 (-)	366	WP_000286415.1	DUF1033 family protein	-
EL277_RS10585 (SPNU_2001)	-	1975818..1976876 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14650.83 Da
• Isoelectric Point: 10.2164

>NTDB_id=71824 EL277_RS10560 WP_000588028.1 1972596..1973000(-) (comGD/cglD) [Streptococcus pneumoniae strain NU83127]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=71824 EL277_RS10560 WP_000588028.1 1972596..1973000(-) (comGD/cglD) [Streptococcus pneumoniae strain NU83127]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTCCAGTCCACTTTTTCAGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	100	100	1
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463