Detailed information NTG0717128

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: NUT31_RS14085
• Genome accession: NZ_CP102454
• Coordinates: 3132969..3134210 (+)
• Length: 413 a.a.
• NCBI ID: WP_268013898.1
• Uniprot ID: -
• Organism: Aeromonas sp. BC14
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3127969..3139210

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NUT31_RS14060 (NUT31_14055)	ampD	3128334..3128906 (-)	573	WP_268013894.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
NUT31_RS14065 (NUT31_14060)	-	3129053..3129523 (+)	471	WP_024944772.1	retropepsin-like aspartic protease	-
NUT31_RS14070 (NUT31_14065)	nadC	3129529..3130386 (+)	858	WP_268013895.1	carboxylating nicotinate-nucleotide diphosphorylase	-
NUT31_RS14075 (NUT31_14070)	-	3130709..3131143 (+)	435	WP_268013896.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
NUT31_RS14080 (NUT31_14075)	pilB	3131147..3132853 (+)	1707	WP_268013897.1	PilB family type IVa pilus assembly ATPase TapB	Machinery gene
NUT31_RS14085 (NUT31_14080)	pilC	3132969..3134210 (+)	1242	WP_268013898.1	type II secretion system F family protein	Machinery gene
NUT31_RS14090 (NUT31_14085)	pilD	3134233..3135105 (+)	873	WP_268013899.1	A24 family peptidase	Machinery gene
NUT31_RS14095 (NUT31_14090)	coaE	3135124..3135738 (+)	615	WP_268013901.1	dephospho-CoA kinase	-
NUT31_RS14100 (NUT31_14095)	zapD	3135776..3136498 (+)	723	WP_024945431.1	cell division protein ZapD	-
NUT31_RS14105 (NUT31_14100)	yacG	3136508..3136702 (+)	195	WP_005305661.1	DNA gyrase inhibitor YacG	-
NUT31_RS14110 (NUT31_14105)	mutT	3136763..3137176 (-)	414	WP_016352173.1	8-oxo-dGTP diphosphatase MutT	-
NUT31_RS14115 (NUT31_14110)	-	3137185..3138369 (-)	1185	WP_268013902.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 413 a.a.
• Molecular weight: 45449.60 Da
• Isoelectric Point: 9.8637

>NTDB_id=717128 NUT31_RS14085 WP_268013898.1 3132969..3134210(+) (pilC) [Aeromonas sp. BC14]
MATLTQKQNAPKKVFAFRWSGVNRKGQKVSGELQADSINTVKAELRKQGVNVTKVNKKSQGLFSKGGAKIKPMDIAVVSR
QITTMLSAGVPLVQSLQIIARSHEKAAMRELMGQIAADVETGTPMSEALRRHPRHFDDLYCDLVEAGEQSGALETIYDRI
ATYREKSEALKSKIKKAMFYPTMVILVAIVVTSILLLFVIPQFEDIFKSFGAELPIFTQFVIGISRFMQNWWYVIFGGIA
LAIFLYVRAWRASQKVKDNTDKFILTIPVVGMILHKAAMARFARTLSTTFSAGIPLVDALVSAAGASGNYVYRTAVMAIR
NEVVAGMQINVAMRTVDLFPDMVIQMVMIGEESGAIDDMLSKVATIFEQEVDDLVDGLTSLLEPLIMVVLGVLVGGMVVA
MYLPIFKLGSVIH

Nucleotide

• Length: 1242 bp

>NTDB_id=717128 NUT31_RS14085 WP_268013898.1 3132969..3134210(+) (pilC) [Aeromonas sp. BC14]
ATGGCAACGCTAACCCAGAAACAGAATGCCCCCAAGAAAGTCTTCGCCTTTCGCTGGAGCGGGGTGAACCGCAAGGGCCA
GAAGGTCTCCGGCGAATTGCAGGCCGACAGCATCAACACGGTCAAGGCAGAGCTGCGCAAACAGGGTGTCAACGTCACCA
AGGTGAACAAGAAGAGCCAGGGGCTCTTCTCCAAGGGCGGCGCCAAGATCAAACCGATGGACATCGCCGTCGTCTCCCGC
CAGATCACCACCATGCTGTCAGCCGGCGTACCTCTGGTACAGAGCCTGCAGATCATCGCTCGCAGCCACGAGAAGGCGGC
CATGCGTGAGCTCATGGGCCAGATTGCCGCCGATGTGGAGACCGGCACCCCCATGTCCGAAGCGCTGCGCCGCCATCCCC
GTCACTTTGACGATCTCTACTGCGATCTGGTGGAGGCTGGCGAACAATCCGGCGCCCTGGAGACCATCTACGATCGTATC
GCCACCTATCGCGAGAAATCGGAAGCCCTCAAGTCCAAGATCAAGAAAGCCATGTTCTACCCCACCATGGTCATCCTGGT
GGCCATTGTCGTTACCTCCATCCTGCTGCTGTTTGTCATTCCCCAGTTCGAGGACATATTCAAGAGCTTCGGTGCCGAAC
TGCCCATCTTCACCCAATTTGTCATCGGCATCTCCCGTTTCATGCAGAACTGGTGGTATGTGATCTTTGGCGGCATAGCG
CTCGCCATCTTTCTCTACGTGCGCGCCTGGCGCGCCTCCCAGAAGGTCAAGGACAACACCGACAAGTTCATACTGACCAT
CCCCGTGGTCGGCATGATATTGCACAAGGCCGCCATGGCCCGCTTCGCCCGCACCCTCTCCACCACCTTCTCTGCCGGTA
TTCCACTGGTGGATGCCTTGGTGTCTGCGGCAGGCGCCTCCGGCAACTATGTCTACCGCACCGCCGTCATGGCCATTCGC
AACGAGGTGGTGGCCGGTATGCAGATCAACGTGGCCATGCGCACCGTGGATCTGTTCCCGGACATGGTGATCCAGATGGT
GATGATCGGCGAGGAGTCTGGCGCCATCGATGATATGCTCTCCAAGGTCGCCACCATCTTCGAACAGGAGGTAGACGATC
TGGTCGACGGCCTCACCAGCCTGCTGGAGCCTCTCATCATGGTGGTGCTGGGGGTTCTGGTCGGCGGCATGGTGGTCGCC
ATGTATCTGCCCATCTTCAAACTGGGATCGGTGATCCACTGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (79-201)

• Type II secretion system (T2SS), protein F (T2SSF) (282-404)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Pseudomonas stutzeri DSM 10701	57.323	95.884	0.55
pilC	Acinetobacter baumannii D1279779	54	96.852	0.523
pilC	Legionella pneumophila strain ERS1305867	51.358	98.063	0.504
pilC	Acinetobacter baylyi ADP1	52.141	96.126	0.501
pilC	Vibrio cholerae strain A1552	47.739	96.368	0.46
pilC	Vibrio campbellii strain DS40M4	46.348	96.126	0.446
pilG	Neisseria gonorrhoeae MS11	40.247	98.063	0.395
pilG	Neisseria meningitidis 44/76-A	40	98.063	0.392
pilC	Thermus thermophilus HB27	37.75	96.852	0.366