Detailed information NTG0716474

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: PO908_RS10085
• Genome accession: NZ_CP117042
• Coordinates: 1954284..1955381 (+)
• Length: 365 a.a.
• NCBI ID: WP_003026800.1
• Uniprot ID: -
• Organism: Streptococcus anginosus strain CGMH_KH1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1949284..1960381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PO908_RS10060 (PO908_10025)	pgsA	1949754..1950293 (-)	540	WP_394467984.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
PO908_RS10065 (PO908_10030)	rodZ	1950304..1951125 (-)	822	WP_021002240.1	cytoskeleton protein RodZ	-
PO908_RS10070 (PO908_10035)	yfmH	1951184..1952479 (-)	1296	WP_021002241.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
PO908_RS10075 (PO908_10040)	yfmF	1952479..1953726 (-)	1248	WP_021002242.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
PO908_RS10080 (PO908_10045)	yaaA	1953902..1954282 (+)	381	WP_003026797.1	S4 domain-containing protein YaaA	-
PO908_RS10085 (PO908_10050)	recF	1954284..1955381 (+)	1098	WP_003026800.1	DNA replication/repair protein RecF	Machinery gene
PO908_RS10090 (PO908_10055)	guaB	1955470..1956951 (-)	1482	WP_003038256.1	IMP dehydrogenase	-
PO908_RS10095 (PO908_10060)	trpS	1957081..1958106 (-)	1026	WP_394467985.1	tryptophan--tRNA ligase	-
PO908_RS10100 (PO908_10065)	galE	1958188..1959183 (-)	996	WP_394467986.1	UDP-glucose 4-epimerase GalE	-
PO908_RS10105 (PO908_10070)	-	1959204..1959893 (-)	690	WP_394467987.1	triose-phosphate isomerase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41979.26 Da
• Isoelectric Point: 8.4522

>NTDB_id=716474 PO908_RS10085 WP_003026800.1 1954284..1955381(+) (recF) [Streptococcus anginosus strain CGMH_KH1]
MWLKNLQIQHFRNYEATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKISGQLVKQTGN
ISLEIDLTPKGRITKVNHLKQSKLSDYVGNMNVVLFAPEDLQLIKGAPALRRKFIDIELGQIKPIYLSDLSHYHHVLKQR
NTYLKTAKTMDETFLAVLDDQLVEFGCRVMQHRIEFLKKLEHFGQQKHLELSSHLENLTIKYCSSVPLSDSNKLKESFQI
ALKQSRSRDLFKKNTGVGPHRDDIAFYINDMNANFGSQGQHRSVVLSLKLAEIELMETVTKEKPILLLDDVMSELDNSRQ
LNLLETISQNIQTFMTTTTLEHLQSMPSNIKIFSIHEGHLTEDKV

Nucleotide

• Length: 1098 bp

>NTDB_id=716474 PO908_RS10085 WP_003026800.1 1954284..1955381(+) (recF) [Streptococcus anginosus strain CGMH_KH1]
ATGTGGTTAAAAAACTTACAAATTCAACATTTTCGTAATTATGAAGCAACTGAAATAGATTTTCATTCTGGTCTCAATAT
TTTTCTAGGCCAAAACGCTCAAGGAAAAACAAATATCTTGGAAGCTATCTATTTTCTTGCATTGACACGAAGTCATCGAA
CTCGTTCAGACAAAGATTTAATTTATTTCTCCAAAGATACCCTGAAAATATCTGGACAACTTGTCAAACAAACTGGAAAT
ATTTCTTTGGAAATTGACTTGACACCTAAAGGAAGAATTACAAAAGTTAATCATCTAAAACAAAGCAAACTATCTGATTA
TGTTGGAAATATGAATGTTGTTTTATTTGCTCCAGAAGATTTACAGTTGATTAAAGGAGCTCCAGCCCTTAGACGAAAAT
TTATTGATATAGAATTGGGGCAAATTAAACCAATCTATTTATCTGATTTATCACATTACCACCATGTCTTAAAACAAAGA
AATACTTATTTAAAAACAGCAAAAACAATGGATGAGACTTTTTTAGCAGTTTTAGATGATCAACTAGTAGAGTTTGGTTG
TCGTGTTATGCAGCATAGGATAGAATTTCTCAAAAAATTAGAGCACTTTGGTCAACAAAAACATTTGGAACTCTCAAGTC
ATTTAGAAAACTTAACCATTAAGTACTGCTCTTCTGTTCCACTTTCAGATTCCAATAAGTTAAAAGAATCTTTCCAAATT
GCATTAAAGCAAAGCCGTAGTAGAGATTTATTTAAAAAAAATACTGGAGTTGGTCCCCATCGAGATGATATTGCTTTTTA
TATCAATGACATGAATGCCAATTTTGGTAGTCAAGGACAACATCGAAGCGTGGTTTTATCTCTCAAACTGGCAGAAATTG
AGCTCATGGAAACTGTTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTTATGAGTGAACTTGACAATAGTCGTCAA
CTTAATTTACTTGAAACTATTTCTCAAAATATCCAAACATTTATGACAACAACAACTCTAGAACATCTACAAAGCATGCC
TTCTAATATTAAAATTTTCTCAATTCATGAAGGGCATCTAACTGAAGACAAGGTGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	72.346	98.082	0.71
recF	Bacillus subtilis subsp. subtilis str. 168	47.701	95.342	0.455