Detailed information NTG0070595

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: H7676_RS08355
• Genome accession: NZ_AP023390
• Coordinates: 1731673..1732779 (+)
• Length: 368 a.a.
• NCBI ID: WP_011185108.1
• Uniprot ID: Q5X9A5
• Organism: Streptococcus pyogenes strain KUN-0014944
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1726673..1737779

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7676_RS08330 (KUN4944_15950)	pgsA	1726782..1727324 (-)	543	WP_002991432.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
H7676_RS08335 (KUN4944_15960)	-	1727338..1728363 (-)	1026	WP_011285332.1	helix-turn-helix domain-containing protein	-
H7676_RS08340 (KUN4944_15970)	yfmH	1728413..1729702 (-)	1290	WP_002991436.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
H7676_RS08345 (KUN4944_15980)	yfmF	1729704..1730948 (-)	1245	WP_030127514.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
H7676_RS08350 (KUN4944_15990)	yaaA	1731258..1731671 (+)	414	WP_011889257.1	S4 domain-containing protein YaaA	-
H7676_RS08355 (KUN4944_16000)	recF	1731673..1732779 (+)	1107	WP_011185108.1	DNA replication/repair protein RecF	Machinery gene
H7676_RS08360 (KUN4944_16010)	-	1732835..1733698 (-)	864	WP_002992310.1	GRP family sugar transporter	-
H7676_RS08365 (KUN4944_16020)	guaB	1733900..1735381 (-)	1482	WP_002991454.1	IMP dehydrogenase	-
H7676_RS08370 (KUN4944_16030)	trpS	1735689..1736711 (-)	1023	WP_002991455.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41795.71 Da
• Isoelectric Point: 7.8294

>NTDB_id=70595 H7676_RS08355 WP_011185108.1 1731673..1732779(+) (recF) [Streptococcus pyogenes strain KUN-0014944]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLAGYGARVMEHRIDFINALEKEANTHHQAISNGLESLSLSYQSSVVFDKKTNIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQIDSDIH

Nucleotide

• Length: 1107 bp

>NTDB_id=70595 H7676_RS08355 WP_011185108.1 1731673..1732779(+) (recF) [Streptococcus pyogenes strain KUN-0014944]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTGAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTGGCTATGGAGC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCGTTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAGTCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAAAACTAATATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGCGTTGGTCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGGATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTCCACGTGACAAAAGGAACCGTTCAAATTGATTCTGATATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

3D structure

• AlphaFold DB: Q5X9A5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.842	99.457	0.625
recF	Bacillus subtilis subsp. subtilis str. 168	45.722	100	0.465