Detailed information NTG0701995

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: NIY05_RS08940
• Genome accession: NZ_CP099857
• Coordinates: 1872322..1873023 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain A54R
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1867322..1878023

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIY05_RS08905 (NIY05_08905)	kdsB	1867845..1868606 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
NIY05_RS08910 (NIY05_08910)	-	1868618..1869598 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
NIY05_RS08915 (NIY05_08915)	-	1869610..1869951 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
NIY05_RS08920 (NIY05_08920)	-	1869969..1870742 (+)	774	WP_000497298.1	TatD family hydrolase	-
NIY05_RS08925 (NIY05_08925)	-	1870780..1871388 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
NIY05_RS08930 (NIY05_08930)	-	1871398..1871952 (+)	555	WP_000841373.1	type II secretion system protein	-
NIY05_RS08935 (NIY05_08935)	xcpV	1871942..1872322 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
NIY05_RS08940 (NIY05_08940)	xcpW	1872322..1873023 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
NIY05_RS08945 (NIY05_08945)	gspK	1873023..1873982 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
NIY05_RS08950 (NIY05_08950)	-	1874213..1874809 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
NIY05_RS08955 (NIY05_08955)	ung	1874860..1875573 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
NIY05_RS08960 (NIY05_08960)	-	1875570..1876694 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
NIY05_RS08965 (NIY05_08965)	tadA	1876701..1877204 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
NIY05_RS08970 (NIY05_08970)	-	1877274..1877717 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=701995 NIY05_RS08940 WP_000594589.1 1872322..1873023(+) (xcpW) [Acinetobacter baumannii strain A54R]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=701995 NIY05_RS08940 WP_000594589.1 1872322..1873023(+) (xcpW) [Acinetobacter baumannii strain A54R]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996