Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   M9H69_RS08605 Genome accession   NZ_CP097843
Coordinates   1701702..1702958 (-) Length   418 a.a.
NCBI ID   WP_250315399.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   facilitate localization of RecA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1696702..1707958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS08580 (M9H69_08580) - 1696796..1697485 (+) 690 WP_084875933.1 DUF308 domain-containing protein -
  M9H69_RS08585 (M9H69_08585) - 1697533..1698249 (-) 717 WP_000532900.1 YebC/PmpR family DNA-binding transcriptional regulator -
  M9H69_RS08590 (M9H69_08590) - 1698346..1699716 (-) 1371 WP_250315397.1 MATE family efflux transporter -
  M9H69_RS08595 (M9H69_08595) - 1699826..1700380 (+) 555 WP_000060288.1 GNAT family N-acetyltransferase -
  M9H69_RS08600 (M9H69_08600) recA 1700499..1701647 (-) 1149 WP_250315398.1 recombinase RecA Machinery gene
  M9H69_RS08605 (M9H69_08605) cinA 1701702..1702958 (-) 1257 WP_250315399.1 competence/damage-inducible protein A Machinery gene
  M9H69_RS08610 (M9H69_08610) - 1703032..1704072 (-) 1041 WP_250315400.1 LCP family protein -
  M9H69_RS08615 (M9H69_08615) - 1704077..1704598 (-) 522 WP_000455522.1 GNAT family N-acetyltransferase -
  M9H69_RS08620 (M9H69_08620) tsaE 1704588..1705031 (-) 444 WP_000288252.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  M9H69_RS08625 (M9H69_08625) comM 1705117..1705740 (-) 624 WP_000978030.1 hypothetical protein Regulator
  M9H69_RS08630 (M9H69_08630) ndk 1705877..1706296 (-) 420 WP_000438306.1 nucleoside-diphosphate kinase -

Sequence

Protein


Download         Length: 418 a.a.        Molecular weight: 45189.49 Da        Isoelectric Point: 4.7088

>NTDB_id=692951 M9H69_RS08605 WP_250315399.1 1701702..1702958(-) (cinA) [Streptococcus oralis strain HP01]
MKAEIIAVGTEILTGQIVNTNAQFLSEKLAEIGVDVYFQTAVGDNEARLLSLLEIASQRSNLVILTGGLGPTEDDLTKQT
LAKFLGKALVFDPQAQEKLDIFFAHRPDYARTPNNERQAQIVEGATPLPNETGLAVGGVSEVNGVTYVVLPGPPSELKPM
VLNQLLPKLMTGTKLYSRVLRFFGIGESQLVTILADLIDHQTDPTLAPYAKTGEVTLRLSTKAVSQEKADQALDILENQI
LNRQTFDGQSLLDICYGYGEETSLASVVVEELKKRQKSITAAESLTAGLFQATLADFSGVSAIFNGGFVTYSLEEKSKML
DISEQELKEYGVVSEFTARKMAEQVRLKTQSDYGVSLTGVAGPDSLEGHPAGTVFIGLAQEQGTEVIKVNIGGRSRADVR
HIAAMHAFNLVRKALLSD

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=692951 M9H69_RS08605 WP_250315399.1 1701702..1702958(-) (cinA) [Streptococcus oralis strain HP01]
ATGAAAGCAGAAATTATTGCTGTCGGAACAGAAATTTTAACAGGGCAGATCGTCAATACCAATGCTCAGTTTTTATCAGA
GAAGTTAGCCGAAATCGGGGTAGATGTTTATTTTCAAACAGCTGTCGGAGACAATGAAGCTCGTCTTTTGTCCTTGCTTG
AGATTGCGAGTCAACGTAGCAATCTTGTGATTTTGACAGGGGGTTTGGGACCAACCGAGGATGATTTGACCAAACAAACT
CTGGCAAAATTTTTAGGAAAAGCTCTAGTGTTTGACCCTCAAGCACAAGAGAAATTGGATATTTTCTTTGCTCATAGACC
TGACTATGCTCGGACACCGAATAATGAGCGCCAAGCCCAAATTGTAGAAGGGGCGACCCCACTGCCAAATGAGACAGGTT
TAGCAGTAGGAGGAGTGTCGGAAGTGAATGGCGTGACCTACGTAGTCCTTCCAGGACCGCCAAGTGAGTTAAAACCCATG
GTCTTAAATCAACTTTTACCCAAGCTGATGACTGGCACCAAACTGTATTCCCGAGTGCTTCGTTTCTTTGGGATTGGGGA
GAGTCAGTTGGTGACCATTTTGGCGGATTTGATTGACCATCAAACAGATCCGACCTTGGCGCCTTATGCCAAGACGGGAG
AAGTGACCTTGCGCTTGTCCACAAAAGCAGTCAGTCAAGAAAAGGCTGATCAAGCCTTGGACATCTTGGAGAATCAAATT
TTGAATCGCCAGACTTTCGATGGACAGTCACTGCTAGACATCTGTTATGGATATGGAGAAGAAACCAGTCTAGCAAGTGT
CGTTGTAGAAGAGCTAAAGAAGAGACAGAAAAGCATTACTGCGGCAGAAAGCTTGACGGCAGGTCTCTTTCAGGCTACTT
TAGCAGACTTTTCAGGTGTTTCAGCTATCTTTAATGGCGGTTTTGTCACTTACAGCCTAGAAGAAAAGTCCAAGATGTTG
GATATTTCCGAGCAAGAGCTGAAAGAGTACGGAGTCGTTTCTGAGTTTACGGCTCGAAAAATGGCAGAGCAGGTACGACT
CAAGACTCAGTCTGACTACGGAGTCAGTTTGACGGGTGTGGCAGGGCCAGATAGCTTAGAGGGGCATCCAGCTGGGACAG
TCTTTATAGGATTGGCACAGGAGCAAGGAACTGAGGTCATCAAAGTTAATATTGGAGGCAGAAGTCGAGCAGATGTACGT
CACATCGCAGCTATGCATGCCTTTAACCTAGTTCGCAAGGCTTTATTAAGTGACTAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Damage-inducible protein CinA KH domain (CinA_KH)

(177-243)

Competence-damaged protein (CinA)

(262-414)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus mitis SK321

89.952

100

0.9
  cinA Streptococcus mitis NCTC 12261

89.234

100

0.892
  cinA Streptococcus pneumoniae TIGR4

89.234

100

0.892
  cinA Streptococcus pneumoniae Rx1

89.234

100

0.892
  cinA Streptococcus pneumoniae R6

89.234

100

0.892
  cinA Streptococcus pneumoniae D39

88.995

100

0.89
  cinA Streptococcus mutans UA159

70.574

100

0.706
  cinA Streptococcus suis isolate S10

55.048

99.522

0.548
  cinA Bacillus subtilis subsp. subtilis str. 168

45.694

100

0.457