Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   M9H69_RS08625 Genome accession   NZ_CP097843
Coordinates   1705117..1705740 (-) Length   207 a.a.
NCBI ID   WP_000978030.1    Uniprot ID   E0Q2X7
Organism   Streptococcus oralis strain HP01     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1700117..1710740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS08600 (M9H69_08600) recA 1700499..1701647 (-) 1149 WP_250315398.1 recombinase RecA Machinery gene
  M9H69_RS08605 (M9H69_08605) cinA 1701702..1702958 (-) 1257 WP_250315399.1 competence/damage-inducible protein A Machinery gene
  M9H69_RS08610 (M9H69_08610) - 1703032..1704072 (-) 1041 WP_250315400.1 LCP family protein -
  M9H69_RS08615 (M9H69_08615) - 1704077..1704598 (-) 522 WP_000455522.1 GNAT family N-acetyltransferase -
  M9H69_RS08620 (M9H69_08620) tsaE 1704588..1705031 (-) 444 WP_000288252.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  M9H69_RS08625 (M9H69_08625) comM 1705117..1705740 (-) 624 WP_000978030.1 hypothetical protein Regulator
  M9H69_RS08630 (M9H69_08630) ndk 1705877..1706296 (-) 420 WP_000438306.1 nucleoside-diphosphate kinase -
  M9H69_RS08635 (M9H69_08635) rpoC 1706405..1710070 (-) 3666 WP_250315401.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23641.38 Da        Isoelectric Point: 8.6346

>NTDB_id=692952 M9H69_RS08625 WP_000978030.1 1705117..1705740(-) (comM) [Streptococcus oralis strain HP01]
MMKSIRVLLLLAVAQILFGSCLLWKESFLSLREGNVYFLILIVGVSGFCAGINYFHTLGQKSHSILHSAEKVKLIHNLLL
IINLLASCFILSESIQVGTELQQDLVDLFLPSFFFLLGVDLWIFLPFDKYIRDMDNHLNKKRTVVISVLGTIIFLRNPVT
ISSILLYIGLGFLCARFLFPKSVQREISFYGHVIRDVLFVICIFTFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=692952 M9H69_RS08625 WP_000978030.1 1705117..1705740(-) (comM) [Streptococcus oralis strain HP01]
ATGATGAAATCAATTCGTGTTTTATTATTATTAGCTGTCGCTCAAATTTTATTTGGAAGTTGTTTATTGTGGAAGGAATC
ATTTTTATCCTTAAGAGAAGGAAATGTCTATTTTTTAATTCTCATAGTGGGAGTTTCTGGCTTTTGTGCTGGGATTAATT
ACTTCCATACCTTGGGTCAGAAAAGTCATAGTATTTTGCATTCTGCAGAGAAAGTGAAGCTTATCCATAATCTTCTTTTA
ATCATCAATCTTTTAGCCAGCTGTTTCATTTTATCAGAAAGTATCCAAGTTGGTACTGAGCTTCAGCAGGATCTAGTTGA
CCTCTTTTTGCCTTCATTCTTTTTCTTGCTGGGAGTAGATCTATGGATTTTCTTACCTTTTGATAAATATATTCGGGATA
TGGACAACCATCTCAACAAGAAGAGAACGGTTGTGATTTCCGTTTTAGGCACGATTATTTTCTTGAGAAATCCCGTAACG
ATCTCCTCCATTCTCCTTTATATCGGTCTCGGTTTTTTATGTGCGCGTTTCCTCTTTCCAAAATCCGTGCAAAGGGAAAT
TTCATTTTACGGACATGTGATTCGCGATGTTTTATTTGTTATTTGTATTTTTACCTTTTTCTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0Q2X7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

51.456

99.517

0.512
  comM Streptococcus pneumoniae R6

51.456

99.517

0.512
  comM Streptococcus pneumoniae TIGR4

51.456

99.517

0.512
  comM Streptococcus mitis NCTC 12261

39.594

95.169

0.377
  comM Streptococcus mitis SK321

38.579

95.169

0.367