Detailed information NTG0069126

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: D8S83_RS08425
• Genome accession: NZ_AP018349
• Coordinates: 1695478..1695789 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain GN1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1690478..1700789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D8S83_RS08390	gcvPA	1690980..1692326 (-)	1347	WP_020977293.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
D8S83_RS08395	gcvT	1692346..1693437 (-)	1092	WP_020977294.1	glycine cleavage system aminomethyltransferase GcvT	-
D8S83_RS08400	-	1693596..1694120 (-)	525	WP_020977295.1	shikimate kinase	-
D8S83_RS08405	-	1694110..1694256 (-)	147	WP_001789879.1	hypothetical protein	-
D8S83_RS08410	comGF	1694353..1694850 (-)	498	WP_020977296.1	competence type IV pilus minor pilin ComGF	Machinery gene
D8S83_RS08415	comGE	1694768..1695067 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
D8S83_RS08420	comGD	1695054..1695500 (-)	447	WP_001796473.1	competence type IV pilus minor pilin ComGD	Machinery gene
D8S83_RS08425	comGC	1695478..1695789 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
D8S83_RS08430	comGB	1695803..1696873 (-)	1071	WP_000776407.1	competence type IV pilus assembly protein ComGB	Machinery gene
D8S83_RS08435	comGA	1696845..1697819 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
D8S83_RS08440	-	1697871..1698494 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
D8S83_RS08445	-	1698491..1698820 (-)	330	WP_020977297.1	MTH1187 family thiamine-binding protein	-
D8S83_RS08450	-	1698820..1699806 (-)	987	WP_000161315.1	ROK family glucokinase	-
D8S83_RS08455	-	1699803..1700006 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=69126 D8S83_RS08425 WP_000472256.1 1695478..1695789(-) (comGC) [Staphylococcus aureus strain GN1]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=69126 D8S83_RS08425 WP_000472256.1 1695478..1695789(-) (comGC) [Staphylococcus aureus strain GN1]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369