Detailed information NTG0688872

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: M5V91_RS00080
• Genome accession: NZ_CP097349
• Coordinates: 9134..9517 (+)
• Length: 127 a.a.
• NCBI ID: WP_284521643.1
• Uniprot ID: -
• Organism: Cytobacillus pseudoceanisediminis strain BNO1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4134..14517

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5V91_RS00045 (M5V91_00045)	comER	4892..5716 (-)	825	WP_009333031.1	late competence protein ComER	-
M5V91_RS00050 (M5V91_00050)	-	5806..6444 (+)	639	WP_009333030.1	helix-hairpin-helix domain-containing protein	-
M5V91_RS00055 (M5V91_00055)	-	6560..7123 (+)	564	WP_251175132.1	ComE operon protein 2	-
M5V91_RS00060 (M5V91_00060)	-	7191..7580 (+)	390	WP_284521641.1	hypothetical protein	-
M5V91_RS00065	-	7577..7633 (+)	57	Protein_12	hypothetical protein	-
M5V91_RS00070	-	7688..8488 (+)	801	WP_284522316.1	ComEC/Rec2 family competence protein	-
M5V91_RS00075	-	8452..8913 (+)	462	WP_284521642.1	hypothetical protein	-
M5V91_RS00080 (M5V91_00070)	comEC	9134..9517 (+)	384	WP_284521643.1	ComEC/Rec2 family competence protein	Machinery gene
M5V91_RS00085 (M5V91_00075)	-	9652..9786 (-)	135	WP_019382872.1	YqzM family protein	-
M5V91_RS00090 (M5V91_00080)	-	9886..10041 (+)	156	WP_284521644.1	hypothetical protein	-
M5V91_RS00095 (M5V91_00085)	holA	10142..11179 (+)	1038	WP_251175134.1	DNA polymerase III subunit delta	-
M5V91_RS00100 (M5V91_00090)	rpsT	11321..11587 (-)	267	WP_009333026.1	30S ribosomal protein S20	-
M5V91_RS00105 (M5V91_00095)	gpr	11824..12951 (+)	1128	WP_251175135.1	GPR endopeptidase	-
M5V91_RS00110 (M5V91_00100)	spoIIP	13021..14223 (+)	1203	Protein_21	stage II sporulation protein P	-

Sequence

Protein

• Length: 127 a.a.
• Molecular weight: 13848.66 Da
• Isoelectric Point: 9.9698

>NTDB_id=688872 M5V91_RS00080 WP_284521643.1 9134..9517(+) (comEC) [Cytobacillus pseudoceanisediminis strain BNO1]
MGDVYTGKNDSSIVLFAKVGGLNWLFTGDLEETGESQLIKAYPNLKIDVLKIAHHGSKTSTTESFLAAVKPRIAVISAGR
NNRYGHPHNDVTGRLKDINVHVLRTDKQGAVNYVFKGNSGTFSVQHP

Nucleotide

• Length: 384 bp

>NTDB_id=688872 M5V91_RS00080 WP_284521643.1 9134..9517(+) (comEC) [Cytobacillus pseudoceanisediminis strain BNO1]
ATGGGGGACGTGTATACAGGGAAAAATGATAGCTCTATTGTCCTTTTTGCCAAAGTGGGTGGCCTTAACTGGCTGTTTAC
CGGAGATTTGGAGGAAACGGGGGAAAGTCAGCTTATAAAAGCTTATCCCAATTTGAAAATTGATGTTTTAAAGATTGCAC
ATCATGGAAGCAAAACCTCCACAACAGAATCATTTCTGGCTGCTGTTAAGCCGAGAATTGCCGTTATTTCTGCAGGCAGA
AACAACAGGTATGGGCATCCTCATAATGATGTAACGGGCAGGCTTAAAGACATTAATGTGCATGTTCTGAGAACCGATAA
GCAAGGGGCGGTTAACTATGTTTTTAAAGGAAATTCAGGAACCTTTTCCGTTCAGCATCCATAG

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (15-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	50.833	94.488	0.48
comEC/celB	Streptococcus pneumoniae TIGR4	47.009	92.126	0.433
comEC/celB	Streptococcus mitis NCTC 12261	48.649	87.402	0.425
comEC/celB	Streptococcus mitis SK321	48.649	87.402	0.425
comEC/celB	Streptococcus pneumoniae D39	46.154	92.126	0.425
comEC/celB	Streptococcus pneumoniae Rx1	46.154	92.126	0.425
comEC/celB	Streptococcus pneumoniae R6	46.154	92.126	0.425
comA/comEC	Acinetobacter baumannii D1279779	45.378	93.701	0.425
comA/comEC	Acinetobacter baumannii strain A118	45.378	93.701	0.425
comEC	Lactococcus lactis subsp. cremoris KW2	46.667	82.677	0.386
comEC	Latilactobacillus sakei subsp. sakei 23K	44.037	85.827	0.378
comA/comEC	Acinetobacter baylyi ADP1	39.496	93.701	0.37
comA	Neisseria gonorrhoeae MS11	43.396	83.465	0.362