Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   M2A29_RS16725 Genome accession   NZ_CP096812
Coordinates   3565435..3566589 (+) Length   384 a.a.
NCBI ID   WP_000755281.1    Uniprot ID   A0A059ZKS3
Organism   Acinetobacter baumannii strain 51248     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3560435..3571589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2A29_RS16700 (M2A29_16700) - 3560586..3561800 (+) 1215 WP_272278116.1 oxygenase MpaB family protein -
  M2A29_RS16705 (M2A29_16705) - 3561870..3562076 (-) 207 WP_000182542.1 hypothetical protein -
  M2A29_RS16710 (M2A29_16710) - 3562130..3564244 (-) 2115 WP_272278113.1 TonB-dependent copper receptor -
  M2A29_RS16715 (M2A29_16715) - 3564317..3564745 (-) 429 WP_000231984.1 DUF2946 family protein -
  M2A29_RS16720 (M2A29_16720) def 3564782..3565312 (-) 531 WP_001196539.1 peptide deformylase -
  M2A29_RS16725 (M2A29_16725) tsaP 3565435..3566589 (+) 1155 WP_000755281.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  M2A29_RS16730 (M2A29_16730) dprA 3566610..3567740 (+) 1131 WP_234693779.1 DNA-processing protein DprA Machinery gene
  M2A29_RS16735 (M2A29_16735) - 3567791..3568360 (+) 570 WP_000633612.1 Sua5/YciO/YrdC/YwlC family protein -
  M2A29_RS16740 (M2A29_16740) - 3568752..3569672 (-) 921 WP_272278110.1 DMT family transporter -
  M2A29_RS16745 (M2A29_16745) - 3569778..3570428 (-) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -

Sequence

Protein


Download         Length: 384 a.a.        Molecular weight: 42350.28 Da        Isoelectric Point: 8.5816

>NTDB_id=684335 M2A29_RS16725 WP_000755281.1 3565435..3566589(+) (tsaP) [Acinetobacter baumannii strain 51248]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=684335 M2A29_RS16725 WP_000755281.1 3565435..3566589(+) (tsaP) [Acinetobacter baumannii strain 51248]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTAGGTATTATTCGCCGCTACACTGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGCTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGACCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(57-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A059ZKS3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

99.479

100

0.995