Detailed information NTG0675074

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OH787_RS25430
• Genome accession: NZ_CP109377
• Coordinates: 5678364..5679650 (+)
• Length: 428 a.a.
• NCBI ID: WP_202201570.1
• Uniprot ID: A0ABQ3TIA3
• Organism: Streptomyces sp. NBC_01547
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5673364..5684650

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH787_RS25395 (OH787_25345)	-	5673847..5674041 (+)	195	WP_030008564.1	membrane protein	-
OH787_RS25400 (OH787_25350)	-	5674044..5674646 (+)	603	WP_252309253.1	hypothetical protein	-
OH787_RS25415 (OH787_25365)	tig	5675204..5676592 (+)	1389	WP_202201569.1	trigger factor	-
OH787_RS25420 (OH787_25370)	clpP	5676869..5677486 (+)	618	WP_030008567.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OH787_RS25425 (OH787_25375)	clpP	5677542..5678210 (+)	669	WP_272934852.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OH787_RS25430 (OH787_25380)	clpX	5678364..5679650 (+)	1287	WP_202201570.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OH787_RS25435 (OH787_25385)	-	5679720..5680652 (-)	933	WP_202201571.1	hypothetical protein	-
OH787_RS25440 (OH787_25390)	-	5680780..5683401 (+)	2622	WP_202201572.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46860.78 Da
• Isoelectric Point: 4.8189

>NTDB_id=675074 OH787_RS25430 WP_202201570.1 5678364..5679650(+) (clpX) [Streptomyces sp. NBC_01547]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFERGALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=675074 OH787_RS25430 WP_202201570.1 5678364..5679650(+) (clpX) [Streptomyces sp. NBC_01547]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTCTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAGCTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCGGTAGCGGTCTACAACCACTACAAGCGGGTGCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCGGGCAAGACGCTGCTCGCGCAGA
CGCTCGCCCGCATGCTGAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACGACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGTTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCCGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGCTGTTCGAACTCGATGGTGT
GGAGCTGGACTTCGAGCGCGGGGCGCTTGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCGGACGTGGTCCGCTCCAACGTCAACCCGACGCTGGTCCCGCGGATCGTCCCGAAGGACCAGGGCCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516