Detailed information NTG0673140

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: MUA52_RS06470
• Genome accession: NZ_CP094814
• Coordinates: 1310447..1310758 (+)
• Length: 103 a.a.
• NCBI ID: WP_262619484.1
• Uniprot ID: -
• Organism: Staphylococcus agnetis strain IVB6175
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1305447..1315758

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA52_RS06440 (MUA52_06445)	-	1306224..1306427 (+)	204	WP_037567684.1	YqgQ family protein	-
MUA52_RS06445 (MUA52_06450)	-	1306424..1307410 (+)	987	WP_060551128.1	ROK family glucokinase	-
MUA52_RS06450 (MUA52_06455)	-	1307411..1307722 (+)	312	WP_037567688.1	MTH1187 family thiamine-binding protein	-
MUA52_RS06455 (MUA52_06460)	-	1307737..1308360 (+)	624	WP_262617574.1	MBL fold metallo-hydrolase	-
MUA52_RS06460 (MUA52_06465)	comGA	1308416..1309390 (+)	975	WP_060551125.1	competence type IV pilus ATPase ComGA	Machinery gene
MUA52_RS06465 (MUA52_06470)	comGB	1309359..1310426 (+)	1068	WP_262617575.1	competence type IV pilus assembly protein ComGB	-
MUA52_RS06470 (MUA52_06475)	comGC	1310447..1310758 (+)	312	WP_262619484.1	competence type IV pilus major pilin ComGC	Machinery gene
MUA52_RS06475 (MUA52_06480)	comGD	1310748..1311179 (+)	432	WP_262617576.1	competence type IV pilus minor pilin ComGD	-
MUA52_RS06480 (MUA52_06485)	-	1311371..1311853 (+)	483	WP_262617577.1	competence type IV pilus minor pilin ComGF	-
MUA52_RS06485 (MUA52_06490)	-	1311837..1312034 (+)	198	WP_262619525.1	hypothetical protein	-
MUA52_RS06490 (MUA52_06495)	-	1311973..1312542 (+)	570	WP_262619485.1	shikimate kinase	-
MUA52_RS06495 (MUA52_06500)	gcvT	1312694..1313785 (+)	1092	WP_262617578.1	glycine cleavage system aminomethyltransferase GcvT	-
MUA52_RS06500 (MUA52_06505)	gcvPA	1313797..1315146 (+)	1350	WP_262617579.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11491.65 Da
• Isoelectric Point: 9.5060

>NTDB_id=673140 MUA52_RS06470 WP_262619484.1 1310447..1310758(+) (comGC) [Staphylococcus agnetis strain IVB6175]
MIHKLKNKKGFTLIEMLLVLLIISVLLILIIPNIAKQSEHIQKTGCAAQLKLVDSQIEAYTLKYNRKPATIEELVQEGYI
KENQKNCKSGESITIRGGEAIAS

Nucleotide

• Length: 312 bp

>NTDB_id=673140 MUA52_RS06470 WP_262619484.1 1310447..1310758(+) (comGC) [Staphylococcus agnetis strain IVB6175]
ATGATTCACAAGCTAAAAAATAAAAAAGGATTCACGTTAATTGAAATGCTGCTTGTATTACTGATTATTAGCGTTTTATT
AATTTTAATTATCCCAAACATAGCTAAACAATCTGAACACATTCAAAAAACAGGCTGTGCTGCACAACTTAAACTTGTTG
ACAGTCAAATAGAAGCATATACATTAAAATACAATCGTAAACCTGCAACTATAGAAGAACTTGTTCAAGAAGGTTATATT
AAGGAGAATCAAAAGAATTGTAAAAGTGGTGAAAGCATCACAATCCGTGGTGGCGAGGCTATTGCATCGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	68.932	100	0.689
comGC	Staphylococcus aureus MW2	68.932	100	0.689
comGC	Bacillus subtilis subsp. subtilis str. 168	44.086	90.291	0.398
comYC	Streptococcus suis isolate S10	52.632	73.786	0.388
comYC	Streptococcus gordonii str. Challis substr. CH1	50.633	76.699	0.388
comGC/cglC	Streptococcus mitis NCTC 12261	51.316	73.786	0.379
comGC/cglC	Streptococcus mitis SK321	51.316	73.786	0.379
comGC/cglC	Streptococcus pneumoniae R6	50	73.786	0.369
comGC/cglC	Streptococcus pneumoniae TIGR4	50	73.786	0.369
comGC/cglC	Streptococcus pneumoniae Rx1	50	73.786	0.369
comGC/cglC	Streptococcus pneumoniae D39	50	73.786	0.369
comYC	Streptococcus mutans UA140	48.101	76.699	0.369
comYC	Streptococcus mutans UA159	48.101	76.699	0.369