Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MUA52_RS06460 | Genome accession | NZ_CP094814 |
| Coordinates | 1308416..1309390 (+) | Length | 324 a.a. |
| NCBI ID | WP_060551125.1 | Uniprot ID | - |
| Organism | Staphylococcus agnetis strain IVB6175 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1303416..1314390
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA52_RS06425 (MUA52_06430) | rpmG | 1303949..1304113 (+) | 165 | WP_256903594.1 | 50S ribosomal protein L33 | - |
| MUA52_RS06430 (MUA52_06435) | - | 1304226..1304765 (+) | 540 | WP_262617572.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| MUA52_RS06435 (MUA52_06440) | - | 1304783..1306222 (+) | 1440 | WP_262617573.1 | rhomboid family intramembrane serine protease | - |
| MUA52_RS06440 (MUA52_06445) | - | 1306224..1306427 (+) | 204 | WP_037567684.1 | YqgQ family protein | - |
| MUA52_RS06445 (MUA52_06450) | - | 1306424..1307410 (+) | 987 | WP_060551128.1 | ROK family glucokinase | - |
| MUA52_RS06450 (MUA52_06455) | - | 1307411..1307722 (+) | 312 | WP_037567688.1 | MTH1187 family thiamine-binding protein | - |
| MUA52_RS06455 (MUA52_06460) | - | 1307737..1308360 (+) | 624 | WP_262617574.1 | MBL fold metallo-hydrolase | - |
| MUA52_RS06460 (MUA52_06465) | comGA | 1308416..1309390 (+) | 975 | WP_060551125.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MUA52_RS06465 (MUA52_06470) | comGB | 1309359..1310426 (+) | 1068 | WP_262617575.1 | competence type IV pilus assembly protein ComGB | - |
| MUA52_RS06470 (MUA52_06475) | comGC | 1310447..1310758 (+) | 312 | WP_262619484.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MUA52_RS06475 (MUA52_06480) | comGD | 1310748..1311179 (+) | 432 | WP_262617576.1 | competence type IV pilus minor pilin ComGD | - |
| MUA52_RS06480 (MUA52_06485) | - | 1311371..1311853 (+) | 483 | WP_262617577.1 | competence type IV pilus minor pilin ComGF | - |
| MUA52_RS06485 (MUA52_06490) | - | 1311837..1312034 (+) | 198 | WP_262619525.1 | hypothetical protein | - |
| MUA52_RS06490 (MUA52_06495) | - | 1311973..1312542 (+) | 570 | WP_262619485.1 | shikimate kinase | - |
| MUA52_RS06495 (MUA52_06500) | gcvT | 1312694..1313785 (+) | 1092 | WP_262617578.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36974.82 Da Isoelectric Point: 7.8369
>NTDB_id=673139 MUA52_RS06460 WP_060551125.1 1308416..1309390(+) (comGA) [Staphylococcus agnetis strain IVB6175]
MQLLIDHVVQYAIKHEASDIHFIPNSSQVEVKLRVKDHLQCFDTLNLETYQKLLTLLKFKAGLDVSSRHKAQSGRYIYEF
ETLYYLRVSTLPLNLGSESCVIRITPQLFQADFNQTAHDIQRIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKEVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKQDLIQALNLIVNQRLITTNNHSRRLVYELMSQEDIQYFLNHNFLLPKNFKSLNDKLNDLQKKGEIDAHTLR
KYQK
MQLLIDHVVQYAIKHEASDIHFIPNSSQVEVKLRVKDHLQCFDTLNLETYQKLLTLLKFKAGLDVSSRHKAQSGRYIYEF
ETLYYLRVSTLPLNLGSESCVIRITPQLFQADFNQTAHDIQRIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKEVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKQDLIQALNLIVNQRLITTNNHSRRLVYELMSQEDIQYFLNHNFLLPKNFKSLNDKLNDLQKKGEIDAHTLR
KYQK
Nucleotide
Download Length: 975 bp
>NTDB_id=673139 MUA52_RS06460 WP_060551125.1 1308416..1309390(+) (comGA) [Staphylococcus agnetis strain IVB6175]
ATGCAACTATTAATTGATCATGTTGTTCAATATGCTATTAAACATGAGGCGTCTGATATCCATTTTATCCCTAATTCATC
ACAAGTAGAGGTCAAGCTAAGAGTTAAAGATCATTTGCAATGTTTTGACACATTAAATTTAGAAACGTATCAAAAATTGT
TAACATTATTAAAATTCAAAGCAGGCCTTGATGTTTCCTCAAGACATAAAGCACAAAGCGGTCGTTACATTTACGAATTT
GAGACTTTATACTATTTACGTGTATCAACTCTACCTCTAAATTTAGGTTCTGAAAGTTGCGTGATTCGTATCACACCTCA
ACTTTTTCAAGCAGATTTCAACCAAACTGCACATGATATACAAAGAATTATGGAAAAGAAACAAGGTTTAATTTTATTTA
GTGGTCCTACTGGCGCTGGCAAGAGTACATTAATGTACCAAATGGTGGTTTATGCAAAAGAAAAACTCAATTTAAATATC
ATTACTATCGAAGATCCTGTCGAACAATTGCTAAATGGTGTAACTCAGATTTCAGTAAATGAAAAAGCTGATATCACATA
TGGCAACTCATTAAAGGCTATTTTACGTTGCGATCCCGACGTTATATTGATTGGTGAAATTAGAGATGGATTAATTGCTA
AGGAAGTGATTCAAGCAAGTTTAAGTGGACACTTAGTTTTATCGACCATTCATGCAAATGATTGTCAAGGTGTATTGTTA
CGATTAATCGAAATGGGGATAACTAAACAAGATTTAATTCAGGCACTCAACTTAATTGTAAATCAAAGGTTAATTACAAC
TAATAATCATTCAAGACGCTTAGTCTACGAGTTAATGTCTCAAGAAGATATACAATACTTTTTAAACCATAATTTTTTAC
TTCCTAAAAATTTTAAAAGTCTAAATGACAAACTTAATGATTTACAAAAGAAAGGAGAGATAGATGCGCACACACTTAGA
AAATATCAAAAATAG
ATGCAACTATTAATTGATCATGTTGTTCAATATGCTATTAAACATGAGGCGTCTGATATCCATTTTATCCCTAATTCATC
ACAAGTAGAGGTCAAGCTAAGAGTTAAAGATCATTTGCAATGTTTTGACACATTAAATTTAGAAACGTATCAAAAATTGT
TAACATTATTAAAATTCAAAGCAGGCCTTGATGTTTCCTCAAGACATAAAGCACAAAGCGGTCGTTACATTTACGAATTT
GAGACTTTATACTATTTACGTGTATCAACTCTACCTCTAAATTTAGGTTCTGAAAGTTGCGTGATTCGTATCACACCTCA
ACTTTTTCAAGCAGATTTCAACCAAACTGCACATGATATACAAAGAATTATGGAAAAGAAACAAGGTTTAATTTTATTTA
GTGGTCCTACTGGCGCTGGCAAGAGTACATTAATGTACCAAATGGTGGTTTATGCAAAAGAAAAACTCAATTTAAATATC
ATTACTATCGAAGATCCTGTCGAACAATTGCTAAATGGTGTAACTCAGATTTCAGTAAATGAAAAAGCTGATATCACATA
TGGCAACTCATTAAAGGCTATTTTACGTTGCGATCCCGACGTTATATTGATTGGTGAAATTAGAGATGGATTAATTGCTA
AGGAAGTGATTCAAGCAAGTTTAAGTGGACACTTAGTTTTATCGACCATTCATGCAAATGATTGTCAAGGTGTATTGTTA
CGATTAATCGAAATGGGGATAACTAAACAAGATTTAATTCAGGCACTCAACTTAATTGTAAATCAAAGGTTAATTACAAC
TAATAATCATTCAAGACGCTTAGTCTACGAGTTAATGTCTCAAGAAGATATACAATACTTTTTAAACCATAATTTTTTAC
TTCCTAAAAATTTTAAAAGTCTAAATGACAAACTTAATGATTTACAAAAGAAAGGAGAGATAGATGCGCACACACTTAGA
AAATATCAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.824 |
99.691 |
0.586 |
| comGA | Staphylococcus aureus N315 |
58.824 |
99.691 |
0.586 |