Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilE   Type   Machinery gene
Locus tag   MON37_RS09705 Genome accession   NZ_CP094242
Coordinates   2071322..2071810 (-) Length   162 a.a.
NCBI ID   WP_039409671.1    Uniprot ID   A0A0C1EBT2
Organism   Morococcus cerebrosus strain CIP 81.93     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2066322..2076810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON37_RS09680 (MON37_09680) tyrS 2067424..2068719 (+) 1296 WP_039409663.1 tyrosine--tRNA ligase -
  MON37_RS09685 (MON37_09685) - 2068787..2070208 (-) 1422 WP_039409665.1 sulfatase-like hydrolase/transferase -
  MON37_RS09690 (MON37_09690) - 2070210..2070332 (+) 123 Protein_1871 IS5/IS1182 family transposase -
  MON37_RS09695 (MON37_09695) - 2070747..2071226 (-) 480 WP_039409668.1 pilin -
  MON37_RS09705 (MON37_09705) pilE 2071322..2071810 (-) 489 WP_039409671.1 pilin Machinery gene
  MON37_RS09710 (MON37_09710) recG 2073076..2075118 (-) 2043 WP_156122153.1 ATP-dependent DNA helicase RecG -
  MON37_RS09715 (MON37_09715) asd 2075468..2076583 (-) 1116 WP_039409676.1 aspartate-semialdehyde dehydrogenase -

Sequence


Protein


Download         Length: 162 a.a.        Molecular weight: 16522.93 Da        Isoelectric Point: 9.3425

>NTDB_id=668362 MON37_RS09705 WP_039409671.1 2071322..2071810(-) (pilE) [Morococcus cerebrosus strain CIP 81.93]
MKAIQKGFTLIELMIVIAIIGILAVIALPAYQDYTARAQVSEAFSLAEGQKAAVIEYFADKGAYPTSNEAAGVAASSKIT
GKYVDSVAIGGNGVITATMKAKNVNSALTSKTLTLTPATSAAAASAAKNPGSFTWTCGGTIDTKYRPAACRPDVATPATG
NN

Nucleotide


Download         Length: 489 bp        

>NTDB_id=668362 MON37_RS09705 WP_039409671.1 2071322..2071810(-) (pilE) [Morococcus cerebrosus strain CIP 81.93]
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAATTGATGATCGTAATCGCAATTATCGGTATTCTGGCAGTTATCGC
TCTGCCTGCTTACCAAGACTACACCGCCCGTGCCCAAGTTTCTGAAGCATTCTCTTTGGCTGAAGGTCAAAAAGCTGCCG
TAATCGAATACTTTGCCGATAAAGGTGCTTATCCTACGTCTAATGAAGCTGCCGGCGTAGCTGCTTCCTCTAAGATTACC
GGTAAATATGTAGACTCTGTTGCCATTGGTGGAAACGGTGTTATTACTGCTACCATGAAAGCCAAAAATGTTAACTCTGC
TTTGACGAGCAAAACGTTGACTTTAACTCCGGCAACTTCTGCAGCAGCTGCTTCTGCTGCTAAAAATCCTGGTTCTTTCA
CGTGGACTTGCGGTGGTACTATCGATACCAAATACCGTCCTGCTGCCTGCCGCCCTGATGTTGCAACACCTGCAACAGGT
AACAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0C1EBT2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Neisseria gonorrhoeae strain FA1090

49.412

100

0.519

  pilE Neisseria gonorrhoeae MS11

49.704

100

0.519

  pilA2 Legionella pneumophila strain ERS1305867

50.336

91.975

0.463

  pilA2 Legionella pneumophila str. Paris

50.336

91.975

0.463

  pilE Neisseria elongata subsp. glycolytica ATCC 29315

38.095

100

0.444

  pilA/pilA1 Eikenella corrodens VA1

43.373

100

0.444

  comP Acinetobacter baylyi ADP1

42.767

98.148

0.42

  pilA Ralstonia pseudosolanacearum GMI1000

39.521

100

0.407

  pilA Acinetobacter baumannii strain A118

39.623

98.148

0.389

  pilA/pilAI Pseudomonas stutzeri DSM 10701

39.744

96.296

0.383


Multiple sequence alignment