Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | MO978_RS02230 | Genome accession | NZ_CP093959 |
| Coordinates | 429799..430188 (+) | Length | 129 a.a. |
| NCBI ID | WP_010905314.1 | Uniprot ID | S6EQX8 |
| Organism | Lactococcus lactis strain FAM 17919 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 424799..435188
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MO978_RS02205 (MO978_02210) | pepA | 425681..426748 (-) | 1068 | WP_014570380.1 | glutamyl aminopeptidase | - |
| MO978_RS02210 (MO978_02215) | - | 426851..427135 (+) | 285 | WP_003131596.1 | hypothetical protein | - |
| MO978_RS02215 (MO978_02220) | - | 427177..427494 (+) | 318 | WP_003131595.1 | thioredoxin family protein | - |
| MO978_RS02220 (MO978_02225) | ytpR | 427580..428206 (+) | 627 | WP_289421810.1 | YtpR family tRNA-binding protein | - |
| MO978_RS02225 (MO978_02230) | nox | 428369..429709 (+) | 1341 | WP_014570381.1 | H2O-forming NADH oxidase | - |
| MO978_RS02230 (MO978_02235) | ssbB | 429799..430188 (+) | 390 | WP_010905314.1 | single-stranded DNA-binding protein | Machinery gene |
| MO978_RS02235 (MO978_02240) | groES | 430308..430592 (+) | 285 | WP_003131589.1 | co-chaperone GroES | - |
| MO978_RS02240 (MO978_02245) | groL | 430680..432308 (+) | 1629 | WP_003131585.1 | chaperonin GroEL | - |
| MO978_RS02245 (MO978_02250) | - | 432354..433166 (-) | 813 | WP_003131583.1 | MBL fold metallo-hydrolase | - |
| MO978_RS02250 (MO978_02255) | - | 433337..434779 (-) | 1443 | WP_014570382.1 | cell wall metabolism sensor histidine kinase WalK | - |
Sequence
Protein
Download Length: 129 a.a. Molecular weight: 14672.73 Da Isoelectric Point: 8.3705
>NTDB_id=665925 MO978_RS02230 WP_010905314.1 429799..430188(+) (ssbB) [Lactococcus lactis strain FAM 17919]
MNKTMLIGRLTSAPEISKTTNDKSYVRVTLAVNRRFKNEKGEREADFISIIIWGKSAETLVSYAKKGSLISIEGEIRTRN
YTDKQNQKHYVTEILGLSYDLLESRATIALRESAIKTEETLLDAEELPF
MNKTMLIGRLTSAPEISKTTNDKSYVRVTLAVNRRFKNEKGEREADFISIIIWGKSAETLVSYAKKGSLISIEGEIRTRN
YTDKQNQKHYVTEILGLSYDLLESRATIALRESAIKTEETLLDAEELPF
Nucleotide
Download Length: 390 bp
>NTDB_id=665925 MO978_RS02230 WP_010905314.1 429799..430188(+) (ssbB) [Lactococcus lactis strain FAM 17919]
ATGAATAAAACCATGTTAATTGGACGCTTAACCAGTGCGCCAGAAATTTCAAAAACAACAAATGATAAATCATATGTCCG
TGTGACCTTGGCAGTCAATCGCCGTTTCAAAAATGAAAAAGGAGAACGAGAGGCAGATTTTATTTCAATTATTATTTGGG
GAAAATCTGCAGAAACTTTAGTTTCTTACGCAAAAAAAGGAAGTCTTATTTCAATTGAAGGAGAAATTAGAACTAGAAAT
TATACGGATAAGCAAAATCAAAAACATTATGTCACAGAAATCTTAGGACTGAGTTATGATTTACTTGAAAGTAGGGCAAC
AATCGCTTTACGAGAAAGCGCTATAAAGACTGAAGAAACCTTACTTGATGCGGAAGAACTCCCTTTCTAA
ATGAATAAAACCATGTTAATTGGACGCTTAACCAGTGCGCCAGAAATTTCAAAAACAACAAATGATAAATCATATGTCCG
TGTGACCTTGGCAGTCAATCGCCGTTTCAAAAATGAAAAAGGAGAACGAGAGGCAGATTTTATTTCAATTATTATTTGGG
GAAAATCTGCAGAAACTTTAGTTTCTTACGCAAAAAAAGGAAGTCTTATTTCAATTGAAGGAGAAATTAGAACTAGAAAT
TATACGGATAAGCAAAATCAAAAACATTATGTCACAGAAATCTTAGGACTGAGTTATGATTTACTTGAAAGTAGGGCAAC
AATCGCTTTACGAGAAAGCGCTATAAAGACTGAAGAAACCTTACTTGATGCGGAAGAACTCCCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
90.698 |
100 |
0.907 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
60.769 |
100 |
0.612 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
56.923 |
100 |
0.574 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
56.154 |
100 |
0.566 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
56.154 |
100 |
0.566 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
56.154 |
100 |
0.566 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
56.154 |
100 |
0.566 |
| ssbB/cilA | Streptococcus mitis SK321 |
56.154 |
100 |
0.566 |
| ssbA | Streptococcus mutans UA159 |
55.385 |
100 |
0.558 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
43.75 |
86.822 |
0.38 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
44.762 |
81.395 |
0.364 |