Detailed information NTG0066159

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SRT_RS01170
• Genome accession: NZ_AP014612
• Coordinates: 223297..223692 (+)
• Length: 131 a.a.
• NCBI ID: WP_128832763.1
• Uniprot ID: A0A1L7LGZ8
• Organism: Streptococcus troglodytae strain TKU 31
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 218297..228692

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SRT_RS01130 (SRT_02060)	-	218397..219059 (+)	663	WP_128832757.1	type II CAAX endopeptidase family protein	-
SRT_RS01135 (SRT_02070)	proC	219144..219914 (-)	771	WP_128832758.1	pyrroline-5-carboxylate reductase	-
SRT_RS01140 (SRT_02080)	pepA	219972..221038 (-)	1067	Protein_192	glutamyl aminopeptidase	-
SRT_RS01145 (SRT_02090)	-	221098..221406 (+)	309	WP_128832759.1	DUF4651 domain-containing protein	-
SRT_RS01150 (SRT_02100)	-	221384..221713 (+)	330	WP_128832760.1	thioredoxin family protein	-
SRT_RS01155 (SRT_02110)	ytpR	221710..222336 (+)	627	WP_128832761.1	YtpR family tRNA-binding protein	-
SRT_RS01160 (SRT_02120)	-	222423..222854 (+)	432	WP_128832762.1	MarR family transcriptional regulator	-
SRT_RS01165 (SRT_02130)	-	222854..223210 (+)	357	WP_002264000.1	rhodanese-like domain-containing protein	-
SRT_RS01170 (SRT_02140)	ssbA	223297..223692 (+)	396	WP_128832763.1	single-stranded DNA-binding protein	Machinery gene
SRT_RS01175 (SRT_02150)	-	224116..225078 (+)	963	WP_128832764.1	sugar ABC transporter substrate-binding protein	-
SRT_RS01180 (SRT_02160)	-	225078..226402 (+)	1325	Protein_200	sensor histidine kinase	-
SRT_RS01185 (SRT_02180)	-	226399..227079 (+)	681	WP_128832765.1	response regulator transcription factor	-
SRT_RS01190 (SRT_02190)	-	227110..228377 (+)	1268	Protein_202	extracellular solute-binding protein	-
SRT_RS10535	-	228443..228645 (+)	203	Protein_203	hypothetical protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14856.92 Da
• Isoelectric Point: 6.4856

>NTDB_id=66159 SRT_RS01170 WP_128832763.1 223297..223692(+) (ssbA) [Streptococcus troglodytae strain TKU 31]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGERQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRESNAENDLTDLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=66159 SRT_RS01170 WP_128832763.1 223297..223692(+) (ssbA) [Streptococcus troglodytae strain TKU 31]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAGGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTCGATGGAGAATTGCGCACCCGT
AAATATGAAAAAGATGGTGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCTTTTCAATTACTGGAAAGCCGTGCTCA
ACGTGCTATGCGTGAAAGTAATGCTGAAAATGATTTGACCGATTTGGTTCTAGAAGAGGAGGAGCTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: A0A1L7LGZ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	96.947	100	0.969
ssbB	Streptococcus sobrinus strain NIDR 6715-7	79.389	100	0.794
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.748
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.748
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.733
ssbB	Lactococcus lactis subsp. cremoris KW2	59.821	85.496	0.511
ssbA	Bacillus subtilis subsp. subtilis str. 168	50.943	80.916	0.412
ssb	Latilactobacillus sakei subsp. sakei 23K	41.379	88.55	0.366