Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   OHU26_RS22745 Genome accession   NZ_CP108249
Coordinates   5048573..5050495 (-) Length   640 a.a.
NCBI ID   WP_266629468.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00069     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5043573..5055495
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHU26_RS22725 (OHU26_22670) - 5043625..5045703 (+) 2079 WP_266629462.1 molybdopterin oxidoreductase family protein -
  OHU26_RS22730 (OHU26_22675) - 5045711..5046649 (-) 939 WP_266629464.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
  OHU26_RS22735 (OHU26_22680) - 5046646..5047248 (-) 603 WP_405703057.1 hypothetical protein -
  OHU26_RS22740 (OHU26_22685) - 5047342..5048487 (+) 1146 WP_405703059.1 RNA polymerase sigma factor -
  OHU26_RS22745 (OHU26_22690) rcrQ 5048573..5050495 (-) 1923 WP_266629468.1 ABC transporter ATP-binding protein Regulator
  OHU26_RS22750 (OHU26_22695) rcrP 5050492..5052225 (-) 1734 WP_405703063.1 ABC transporter ATP-binding protein Regulator
  OHU26_RS22755 (OHU26_22700) - 5052384..5053838 (-) 1455 WP_266629472.1 FGGY family carbohydrate kinase -
  OHU26_RS22760 (OHU26_22705) - 5053923..5054225 (-) 303 WP_266629474.1 YtxH domain-containing protein -

Sequence

Protein


Download         Length: 640 a.a.        Molecular weight: 68912.48 Da        Isoelectric Point: 5.4166

>NTDB_id=657334 OHU26_RS22745 WP_266629468.1 5048573..5050495(-) (rcrQ) [Streptomyces sp. NBC_00069]
MSGPGGRMMMGPAERSLDFKSSGKRLLRQIAHDRTKLWGMVVAVVGSVGCSVIGPKILGEATDLVFAGIVGRQMPAGITK
QQALDGLRAKGEGGMADMLSGTDFTPGEGIDFGAVGVVAIWALVVFTLAGLLMLVATRLSNHIMNGTVYRMREELQGKLS
RLPLSYFDRQKRGEVLSRATNDIDNIGQTLQQTMGQLLNSLLTIVGVLAMMLWISPLLALVALLTIPVSVFVAAKIGKKS
QPQFVAQWKSTGALNAHIEEMYSGHALVKVFGRQKESAALFAEQNEALYRASFKAQLVSGIMQPVMFFISNINYVLVAVV
GGLRVASGTLSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERVYELLDAQEQEPDTAVPERPEQLRGQVTLDKV
AFRYEPDKPLIENLSLTVEPGHTVAIVGPTGAGKTTLVNLLMRFYEVTGGEIALDGVDIAKMTREELRSGIGMVLQDTWL
FGGTIAENIAYGASREVTRAEIEEAARAAHADRFVRTLPDGYDTVLDDEGAGVSAGEKQLITIARAFLSDPVILVLDEAT
SSVDTRTEVLIQKAMARLAHGRTSFVIAHRLSTIRDADVILVMENGSIVEQGTHEELLAADGAYARLYAAQFAQAVAEVD

Nucleotide


Download         Length: 1923 bp        

>NTDB_id=657334 OHU26_RS22745 WP_266629468.1 5048573..5050495(-) (rcrQ) [Streptomyces sp. NBC_00069]
ATGAGCGGGCCCGGAGGACGGATGATGATGGGGCCGGCCGAGCGGTCCCTGGATTTCAAGAGCTCGGGCAAACGGCTGCT
GCGCCAGATCGCGCACGACCGGACCAAGCTGTGGGGCATGGTCGTCGCCGTCGTCGGCAGCGTCGGCTGCTCGGTCATCG
GCCCGAAGATCCTCGGCGAGGCCACCGACCTGGTGTTCGCGGGGATCGTCGGCCGGCAGATGCCGGCCGGGATCACCAAG
CAACAGGCGCTGGACGGGCTGCGCGCCAAGGGCGAGGGCGGCATGGCGGACATGCTGTCCGGCACCGACTTCACCCCCGG
CGAGGGCATCGACTTCGGTGCCGTCGGGGTCGTGGCGATCTGGGCGCTGGTGGTCTTCACCCTCGCCGGCCTGCTGATGC
TGGTCGCGACGCGGCTGTCGAACCACATCATGAACGGCACCGTGTACCGGATGCGCGAGGAGCTGCAGGGGAAGCTGTCG
CGGCTGCCGCTGTCGTACTTCGACCGGCAAAAGCGCGGTGAGGTGCTCAGCCGGGCCACCAACGACATCGACAACATCGG
GCAGACGCTGCAGCAGACGATGGGTCAGCTGCTCAACTCGCTGCTGACGATCGTCGGCGTGCTGGCGATGATGCTCTGGA
TCTCTCCGCTGCTGGCGCTGGTCGCCCTGCTGACCATTCCCGTCTCGGTCTTCGTCGCGGCGAAGATCGGCAAGAAGTCG
CAGCCGCAGTTCGTGGCGCAGTGGAAGTCCACGGGCGCGCTCAACGCGCACATCGAGGAGATGTACTCGGGCCACGCGCT
GGTCAAGGTCTTCGGCCGGCAGAAGGAGTCCGCGGCGCTCTTCGCCGAGCAGAACGAGGCGCTGTACCGGGCCTCGTTCA
AGGCGCAGCTGGTCAGCGGGATCATGCAGCCGGTGATGTTCTTCATCTCGAACATCAACTACGTGCTGGTGGCGGTCGTC
GGCGGTCTGCGGGTGGCCTCGGGCACCCTGTCGATCGGTGACGTGCAGGCCTTCATCCAGTACTCGCGCCAGTTCTCGAT
GCCGCTGACGCAGGTCGCGTCGATGGCGAACCTGGTGCAGTCCGGTGTCGCCTCGGCGGAGCGGGTGTACGAGCTGCTCG
ACGCGCAGGAGCAGGAGCCGGACACCGCGGTGCCGGAGCGGCCGGAGCAGCTGCGCGGCCAGGTCACGCTCGACAAGGTG
GCCTTCCGGTACGAGCCGGACAAGCCGCTGATCGAGAACCTGTCGCTGACCGTCGAGCCCGGCCACACGGTCGCGATCGT
CGGCCCGACGGGCGCCGGCAAGACCACGCTGGTCAACCTGCTGATGCGGTTCTACGAGGTCACGGGCGGCGAGATCGCCC
TCGACGGGGTGGACATCGCGAAGATGACCCGCGAGGAACTGCGCAGCGGGATCGGCATGGTGCTCCAGGACACGTGGCTG
TTCGGCGGCACCATCGCGGAGAACATCGCCTACGGTGCTTCGCGCGAGGTCACGCGCGCCGAGATCGAGGAGGCGGCGCG
GGCCGCCCACGCGGACCGGTTCGTCCGCACCCTGCCGGACGGCTACGACACCGTGCTGGACGACGAGGGCGCGGGCGTCA
GCGCGGGCGAGAAGCAGCTGATCACCATCGCCCGGGCGTTCCTGTCGGACCCGGTGATCCTGGTGCTCGACGAGGCGACG
AGCTCGGTGGACACCCGTACCGAGGTGCTGATCCAGAAGGCGATGGCCCGCCTCGCGCACGGCCGTACGTCCTTCGTGAT
CGCGCACCGCCTGTCCACGATCCGCGATGCGGACGTGATCCTGGTGATGGAGAACGGCTCGATCGTGGAGCAGGGCACGC
ACGAGGAGCTGCTGGCGGCGGACGGCGCGTACGCGCGGCTGTACGCGGCGCAGTTCGCGCAGGCGGTGGCCGAGGTCGAT
TAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(55-349)

ABC transporter (ABC_tran)

(412-561)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

40.032

97.188

0.389