Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | AB237_RS01600 | Genome accession | NZ_AP013357 |
| Coordinates | 349684..350118 (+) | Length | 144 a.a. |
| NCBI ID | WP_000993717.1 | Uniprot ID | A0AAN5WG10 |
| Organism | Acinetobacter baumannii NCGM 237 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 344684..355118
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB237_RS01580 (AB237_0290) | - | 346076..346963 (+) | 888 | WP_001017314.1 | metal-dependent hydrolase | - |
| AB237_RS01585 (AB237_0291) | - | 347094..347684 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| AB237_RS01590 (AB237_0292) | - | 347706..348788 (+) | 1083 | WP_001246375.1 | YgcG family protein | - |
| AB237_RS01595 | - | 348782..349342 (+) | 561 | WP_000258955.1 | TPM domain-containing protein | - |
| AB237_RS01600 (AB237_0293) | pilA | 349684..350118 (+) | 435 | WP_000993717.1 | pilin | Machinery gene |
| AB237_RS01605 | - | 350176..351486 (+) | 1311 | WP_041114735.1 | O-antigen ligase | - |
| AB237_RS01610 (AB237_0294) | - | 351594..353222 (+) | 1629 | WP_001988049.1 | PglL family O-oligosaccharyltransferase | - |
| AB237_RS01615 (AB237_0295) | bfr | 353264..353728 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14873.98 Da Isoelectric Point: 8.1106
>NTDB_id=65683 AB237_RS01600 WP_000993717.1 349684..350118(+) (pilA) [Acinetobacter baumannii NCGM 237]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQQSTNAC
AITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQQSTNAC
AITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
Nucleotide
Download Length: 435 bp
>NTDB_id=65683 AB237_RS01600 WP_000993717.1 349684..350118(+) (pilA) [Acinetobacter baumannii NCGM 237]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCACAAGTAAGTACTGGTTTAGCTGATATTACTGCTGGTAAGACAAATGCAG
AAACTAAATTAGCAGAAGGTTTAACTGCGGCATTAACTGATGTAACAACTTTAGGTTTACAACAATCTACGAATGCTTGT
GCTATTACAGCCAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACATTGAAAGGTACATCACAAATTAATGGTAA
AAAAATTGAATGGATCCGTGATGCAGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAAACTGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCACAAGTAAGTACTGGTTTAGCTGATATTACTGCTGGTAAGACAAATGCAG
AAACTAAATTAGCAGAAGGTTTAACTGCGGCATTAACTGATGTAACAACTTTAGGTTTACAACAATCTACGAATGCTTGT
GCTATTACAGCCAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACATTGAAAGGTACATCACAAATTAATGGTAA
AAAAATTGAATGGATCCGTGATGCAGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAAACTGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
53.061 |
100 |
0.542 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
44.966 |
100 |
0.465 |
| pilA | Vibrio cholerae strain A1552 |
44.966 |
100 |
0.465 |
| pilA | Vibrio cholerae C6706 |
44.966 |
100 |
0.465 |
| pilA | Pseudomonas aeruginosa PAK |
41.558 |
100 |
0.444 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.366 |
98.611 |
0.437 |
| comP | Acinetobacter baylyi ADP1 |
41.333 |
100 |
0.431 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.553 |
97.917 |
0.417 |
| pilA | Vibrio campbellii strain DS40M4 |
40.278 |
100 |
0.403 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
44 |
86.806 |
0.382 |