Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/comE2   Type   Regulator
Locus tag   ANG_RS00690 Genome accession   NZ_AP013072
Coordinates   126000..126749 (+) Length   249 a.a.
NCBI ID   WP_003038257.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   activate transcription of early competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 121000..131749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS00660 (ANG_0112) spo0J 121547..122314 (-) 768 WP_025271549.1 ParB/RepB/Spo0J family partition protein Regulator
  ANG_RS00665 (ANG_0113) htrA 122369..123559 (-) 1191 WP_003032033.1 S1C family serine protease Regulator
  ANG_RS00670 (ANG_0114) rlmH 123753..124232 (+) 480 WP_004225060.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ANG_RS10760 (ANG_0115) - 124514..124663 (+) 150 WP_003038250.1 bacteriocin -
  ANG_RS00685 (ANG_0116) comD/comD2 124678..126000 (+) 1323 WP_003038254.1 GHKL domain-containing protein Regulator
  ANG_RS00690 (ANG_0117) comE/comE2 126000..126749 (+) 750 WP_003038257.1 competence system response regulator transcription factor ComE Regulator
  ANG_RS00705 (ANG_0118) - 127096..129672 (-) 2577 WP_004225037.1 YfhO family protein -
  ANG_RS00710 (ANG_0119) - 129746..131368 (-) 1623 WP_003038260.1 ATP-binding cassette domain-containing protein -

Sequence


Protein


Download         Length: 249 a.a.        Molecular weight: 29216.88 Da        Isoelectric Point: 8.6042

>NTDB_id=65498 ANG_RS00690 WP_003038257.1 126000..126749(+) (comE/comE2) [Streptococcus anginosus subsp. whileyi MAS624]
MKVLVLEDEITHQVRMETTLAEIAKEMGITIKVKVTGKVREFKEYIENDEVNQLYFLDIDIKGEETKGLEIAKFIRHHNP
YAIIVFVTTKSEFATMTFKYKVSALDFVDKNLSDVAFKKHIKDSIEYTKATLIENKDMVDYFEYSFRGGEVRMPFNDILY
IETTGSSHKLRIVGKNFFKEFYGTIADIQEKDKETRRFFSPHKSYLVNIGNIKGYDKKMREIIFYEDHRCPITRMKLGKL
KAILEELKG

Nucleotide


Download         Length: 750 bp        

>NTDB_id=65498 ANG_RS00690 WP_003038257.1 126000..126749(+) (comE/comE2) [Streptococcus anginosus subsp. whileyi MAS624]
ATGAAAGTATTAGTATTAGAAGATGAAATTACACATCAAGTAAGAATGGAAACAACTTTGGCAGAGATTGCAAAAGAAAT
GGGAATTACGATAAAAGTTAAAGTAACTGGAAAAGTAAGGGAATTTAAAGAATATATTGAAAACGATGAAGTAAATCAAT
TATATTTTTTAGATATTGATATTAAAGGAGAGGAAACAAAAGGTTTAGAAATAGCAAAATTTATACGTCATCACAATCCG
TATGCCATTATTGTTTTTGTTACAACGAAATCAGAATTTGCCACTATGACCTTCAAATATAAGGTATCTGCACTGGATTT
TGTTGATAAAAATTTGAGTGATGTTGCTTTTAAAAAACATATAAAAGACAGCATTGAGTATACAAAAGCGACATTGATTG
AAAATAAAGATATGGTGGATTATTTTGAATATAGCTTTCGTGGCGGAGAGGTTAGAATGCCTTTTAATGACATTTTATAT
ATTGAAACGACAGGCTCTTCTCATAAATTAAGAATTGTCGGTAAAAACTTTTTTAAAGAATTCTATGGCACTATTGCAGA
TATTCAAGAAAAAGATAAAGAAACAAGACGTTTCTTTTCACCTCATAAATCCTACCTAGTCAATATTGGAAACATCAAAG
GTTATGACAAAAAAATGCGAGAAATAATTTTTTATGAAGATCATCGTTGTCCGATTACTCGAATGAAACTTGGAAAATTA
AAAGCTATTTTAGAGGAATTAAAAGGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/comE2 Streptococcus gordonii strain NCTC7865

70.492

97.992

0.691

  comE/comE1 Streptococcus gordonii str. Challis substr. CH1

70.492

97.992

0.691

  comE Streptococcus mitis NCTC 12261

70.204

98.394

0.691

  comE Streptococcus infantis strain Atu-4

69.796

98.394

0.687

  comE Streptococcus mitis SK321

69.388

98.394

0.683

  comE Streptococcus pneumoniae Rx1

68.98

98.394

0.679

  comE Streptococcus pneumoniae D39

68.98

98.394

0.679

  comE Streptococcus pneumoniae R6

68.98

98.394

0.679

  comE Streptococcus pneumoniae TIGR4

68.98

98.394

0.679

  comE/blpR Streptococcus mutans UA159

40.891

99.197

0.406


Multiple sequence alignment