Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ANG_RS00660 Genome accession   NZ_AP013072
Coordinates   121547..122314 (-) Length   255 a.a.
NCBI ID   WP_025271549.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 116547..127314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS00635 (ANG_0107) ychF 116701..117816 (-) 1116 WP_004225045.1 redox-regulated ATPase YchF -
  ANG_RS00640 (ANG_0108) - 117962..118461 (+) 500 Protein_104 DUF1307 domain-containing protein -
  ANG_RS00645 (ANG_0109) - 118485..118682 (-) 198 WP_003038262.1 DUF951 domain-containing protein -
  ANG_RS00650 (ANG_0110) dnaN 118682..119818 (-) 1137 WP_004225019.1 DNA polymerase III subunit beta -
  ANG_RS00655 (ANG_0111) dnaA 119975..121318 (-) 1344 WP_004225063.1 chromosomal replication initiator protein DnaA -
  ANG_RS00660 (ANG_0112) spo0J 121547..122314 (-) 768 WP_025271549.1 ParB/RepB/Spo0J family partition protein Regulator
  ANG_RS00665 (ANG_0113) htrA 122369..123559 (-) 1191 WP_003032033.1 S1C family serine protease Regulator
  ANG_RS00670 (ANG_0114) rlmH 123753..124232 (+) 480 WP_004225060.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ANG_RS10760 (ANG_0115) - 124514..124663 (+) 150 WP_003038250.1 bacteriocin -
  ANG_RS00685 (ANG_0116) comD/comD2 124678..126000 (+) 1323 WP_003038254.1 GHKL domain-containing protein Regulator
  ANG_RS00690 (ANG_0117) comE/comE2 126000..126749 (+) 750 WP_003038257.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29699.27 Da        Isoelectric Point: 9.5487

>NTDB_id=65495 ANG_RS00660 WP_025271549.1 121547..122314(-) (spo0J) [Streptococcus anginosus subsp. whileyi MAS624]
MEKYQYITLNDIQTNPYQPRKEFSEEKIAELASSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIALTMGKSRPYITNSVRLLNLPLNIIEAIKERNISQGHA
RLLINLSEKEQNQWFDKILSQSLSVRQLEKQLHSQQTKTVIKNKHHLFLKEEEKRLKKIFGTEISLQFSKQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=65495 ANG_RS00660 WP_025271549.1 121547..122314(-) (spo0J) [Streptococcus anginosus subsp. whileyi MAS624]
ATGGAAAAATATCAATATATCACACTTAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAGTTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCGATAATTGGTT
ATGAATTGCTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACAAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATCATTGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTGATTGACAAAGGGTTGACACATAAAGAAATCGCTCTAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCCGTCCGGTTATTAAATTTACCTCTCAATATTATCGAAGCGATAAAAGAAAGAAATATTTCTCAGGGACACGCT
CGTCTGCTCATTAATCTCTCAGAAAAAGAGCAAAATCAGTGGTTTGATAAAATCTTATCTCAAAGCCTTTCAGTTCGACA
GCTAGAAAAACAATTGCATTCCCAACAGACAAAAACTGTAATAAAAAATAAACATCATCTCTTCCTCAAAGAGGAAGAAA
AAAGATTAAAAAAGATATTTGGTACAGAGATTTCTCTTCAATTTTCTAAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-191)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.118

100

0.541

Multiple sequence alignment