Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | MAK07_RS02840 | Genome accession | NZ_CP091875 |
| Coordinates | 505838..506266 (+) | Length | 142 a.a. |
| NCBI ID | WP_000934782.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain MN8 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 500838..511266
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MAK07_RS02780 (MAK07_10375) | - | 500931..501245 (-) | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | - |
| MAK07_RS02785 (MAK07_10370) | - | 501397..501633 (+) | 237 | WP_001121116.1 | helix-turn-helix transcriptional regulator | - |
| MAK07_RS02790 (MAK07_10365) | - | 501647..501826 (+) | 180 | WP_000438352.1 | hypothetical protein | - |
| MAK07_RS02795 (MAK07_10360) | - | 501927..502409 (-) | 483 | WP_000394410.1 | hypothetical protein | - |
| MAK07_RS02800 (MAK07_10355) | - | 502855..503040 (+) | 186 | WP_000933365.1 | helix-turn-helix transcriptional regulator | - |
| MAK07_RS02805 (MAK07_10350) | - | 503042..503782 (+) | 741 | WP_001148589.1 | phage antirepressor KilAC domain-containing protein | - |
| MAK07_RS02810 (MAK07_10345) | - | 503958..504188 (-) | 231 | WP_000395455.1 | hypothetical protein | - |
| MAK07_RS02815 (MAK07_10340) | - | 504259..504480 (+) | 222 | WP_000594789.1 | hypothetical protein | - |
| MAK07_RS02820 (MAK07_10335) | - | 504473..504634 (+) | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| MAK07_RS02825 (MAK07_10330) | - | 504731..504991 (+) | 261 | WP_000291090.1 | DUF1108 family protein | - |
| MAK07_RS02830 (MAK07_10325) | - | 505001..505222 (+) | 222 | WP_001077280.1 | DUF2483 family protein | - |
| MAK07_RS02835 (MAK07_10320) | - | 505215..505838 (+) | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| MAK07_RS02840 (MAK07_10315) | ssbA | 505838..506266 (+) | 429 | WP_000934782.1 | single-stranded DNA-binding protein | Machinery gene |
| MAK07_RS02845 (MAK07_10310) | - | 506280..506948 (+) | 669 | WP_001121805.1 | putative HNHc nuclease | - |
| MAK07_RS02850 (MAK07_10305) | - | 506948..507712 (+) | 765 | WP_000240900.1 | AP2 domain-containing protein | - |
| MAK07_RS02855 (MAK07_10300) | - | 507705..508448 (+) | 744 | WP_000139436.1 | conserved phage C-terminal domain-containing protein | - |
| MAK07_RS02860 (MAK07_10295) | - | 508459..509238 (+) | 780 | WP_000803056.1 | ATP-binding protein | - |
| MAK07_RS02865 (MAK07_10290) | - | 509232..509393 (+) | 162 | WP_000237153.1 | hypothetical protein | - |
| MAK07_RS02870 (MAK07_10285) | - | 509406..509627 (+) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| MAK07_RS02875 (MAK07_10280) | - | 509638..510042 (+) | 405 | WP_000049812.1 | DUF1064 domain-containing protein | - |
| MAK07_RS02880 (MAK07_10275) | - | 510047..510232 (+) | 186 | WP_001187263.1 | DUF3113 family protein | - |
| MAK07_RS02885 (MAK07_10270) | - | 510233..510501 (+) | 269 | Protein_562 | helix-turn-helix transcriptional regulator | - |
| MAK07_RS02890 (MAK07_10265) | - | 510502..510861 (+) | 360 | WP_000029379.1 | SA1788 family PVL leukocidin-associated protein | - |
| MAK07_RS02895 (MAK07_10260) | - | 510862..511110 (+) | 249 | WP_001126836.1 | phi PVL orf 51-like protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15980.48 Da Isoelectric Point: 5.8724
>NTDB_id=654077 MAK07_RS02840 WP_000934782.1 505838..506266(+) (ssbA) [Staphylococcus aureus strain MN8]
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYENKDGQRVFVTEVAADSVQFLEPKNSNQQPNNNYHQQRQTQTGNNPFDNTTAITDDDLPF
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYENKDGQRVFVTEVAADSVQFLEPKNSNQQPNNNYHQQRQTQTGNNPFDNTTAITDDDLPF
Nucleotide
Download Length: 429 bp
>NTDB_id=654077 MAK07_RS02840 WP_000934782.1 505838..506266(+) (ssbA) [Staphylococcus aureus strain MN8]
ATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAACGCCAAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTATGAAAACAAAGACGGGCAACGTGTGTTTGTTACAGAAGTAGCAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAGCAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAATACCACTG
CGATTACTGATGATGACTTACCGTTCTGA
ATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAACGCCAAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTATGAAAACAAAGACGGGCAACGTGTGTTTGTTACAGAAGTAGCAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAGCAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAATACCACTG
CGATTACTGATGATGACTTACCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.721 |
100 |
0.711 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.599 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
74.648 |
0.437 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
42.657 |
100 |
0.43 |
| ssbA | Streptococcus mutans UA159 |
41.549 |
100 |
0.415 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
40.845 |
100 |
0.408 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
40.845 |
100 |
0.408 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
40.141 |
100 |
0.401 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
40.141 |
100 |
0.401 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
40.141 |
100 |
0.401 |
| ssbB/cilA | Streptococcus mitis SK321 |
40.141 |
100 |
0.401 |