Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | L2Z17_RS01990 | Genome accession | NZ_CP091358 |
| Coordinates | 408736..409170 (+) | Length | 144 a.a. |
| NCBI ID | WP_000993717.1 | Uniprot ID | A0AAN5WG10 |
| Organism | Acinetobacter baumannii strain AB181-VUB | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 403736..414170
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2Z17_RS01970 (L2Z17_01970) | - | 405128..406015 (+) | 888 | WP_001017314.1 | metal-dependent hydrolase | - |
| L2Z17_RS01975 (L2Z17_01975) | - | 406146..406736 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| L2Z17_RS01980 (L2Z17_01980) | - | 406758..407840 (+) | 1083 | WP_001246375.1 | TPM domain-containing protein | - |
| L2Z17_RS01985 (L2Z17_01985) | - | 407834..408394 (+) | 561 | WP_000258955.1 | TPM domain-containing protein | - |
| L2Z17_RS01990 (L2Z17_01990) | pilA | 408736..409170 (+) | 435 | WP_000993717.1 | pilin | Machinery gene |
| L2Z17_RS01995 (L2Z17_01995) | - | 409228..410537 (+) | 1310 | Protein_374 | O-antigen ligase family protein | - |
| L2Z17_RS02000 (L2Z17_02000) | - | 410645..412309 (+) | 1665 | WP_050495856.1 | O-antigen ligase family protein | - |
| L2Z17_RS02005 (L2Z17_02005) | - | 412343..413433 (+) | 1091 | WP_085940413.1 | IS4-like element ISAba1 family transposase | - |
| L2Z17_RS02010 (L2Z17_02010) | bfr | 413504..413968 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14873.98 Da Isoelectric Point: 8.1106
>NTDB_id=650205 L2Z17_RS01990 WP_000993717.1 408736..409170(+) (pilA) [Acinetobacter baumannii strain AB181-VUB]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQQSTNAC
AITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQQSTNAC
AITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
Nucleotide
Download Length: 435 bp
>NTDB_id=650205 L2Z17_RS01990 WP_000993717.1 408736..409170(+) (pilA) [Acinetobacter baumannii strain AB181-VUB]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCACAAGTAAGTACTGGTTTAGCTGATATTACTGCTGGTAAGACAAATGCAG
AAACTAAATTAGCAGAAGGTTTAACTGCGGCATTAACTGATGTAACAACTTTAGGTTTACAACAATCTACGAATGCTTGT
GCTATTACAGCCAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACATTGAAAGGTACATCACAAATTAATGGTAA
AAAAATTGAATGGATCCGTGATGCAGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAAACTGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCACAAGTAAGTACTGGTTTAGCTGATATTACTGCTGGTAAGACAAATGCAG
AAACTAAATTAGCAGAAGGTTTAACTGCGGCATTAACTGATGTAACAACTTTAGGTTTACAACAATCTACGAATGCTTGT
GCTATTACAGCCAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACATTGAAAGGTACATCACAAATTAATGGTAA
AAAAATTGAATGGATCCGTGATGCAGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAAACTGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
53.061 |
100 |
0.542 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
44.966 |
100 |
0.465 |
| pilA | Vibrio cholerae strain A1552 |
44.966 |
100 |
0.465 |
| pilA | Vibrio cholerae C6706 |
44.966 |
100 |
0.465 |
| pilA | Pseudomonas aeruginosa PAK |
41.558 |
100 |
0.444 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.366 |
98.611 |
0.437 |
| comP | Acinetobacter baylyi ADP1 |
41.333 |
100 |
0.431 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.553 |
97.917 |
0.417 |
| pilA | Vibrio campbellii strain DS40M4 |
40.278 |
100 |
0.403 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
44 |
86.806 |
0.382 |