Detailed information NTG0064564

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SPB_RS09020
• Genome accession: NZ_AEUT02000001
• Coordinates: 1805609..1806007 (-)
• Length: 132 a.a.
• NCBI ID: WP_003105619.1
• Uniprot ID: A0A0E2UAZ2
• Organism: Streptococcus parauberis NCFD 2020
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1800609..1811007

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPB_RS08995 (SPB_1858)	-	1800716..1801357 (+)	642	WP_003102694.1	deoxynucleoside kinase	-
SPB_RS09000 (SPB_1859)	-	1801440..1802243 (-)	804	WP_003104647.1	ABC transporter ATP-binding protein	-
SPB_RS09005 (SPB_1860)	-	1802252..1803136 (-)	885	WP_003104091.1	ABC transporter permease	-
SPB_RS09010 (SPB_1861)	-	1803171..1804157 (-)	987	WP_003102951.1	ABC transporter substrate-binding protein	-
SPB_RS09015 (SPB_1862)	-	1804169..1805140 (-)	972	WP_003106116.1	ABC transporter substrate-binding protein	-
SPB_RS09020 (SPB_1863)	ssbA	1805609..1806007 (-)	399	WP_003105619.1	single-stranded DNA-binding protein	Machinery gene
SPB_RS09025 (SPB_1864)	ytpR	1806145..1806771 (-)	627	WP_003104282.1	YtpR family tRNA-binding protein	-
SPB_RS09030 (SPB_1865)	-	1806787..1807104 (-)	318	WP_003103432.1	thioredoxin family protein	-
SPB_RS09035 (SPB_1866)	-	1807104..1807385 (-)	282	WP_003102775.1	DUF4651 domain-containing protein	-
SPB_RS09040 (SPB_1867)	pepA	1807748..1808815 (+)	1068	WP_003105090.1	glutamyl aminopeptidase	-
SPB_RS09045 (SPB_1868)	proC	1808827..1809597 (+)	771	WP_003104671.1	pyrroline-5-carboxylate reductase	-
SPB_RS09050 (SPB_1869)	-	1809614..1810267 (-)	654	WP_003104674.1	CPBP family intramembrane glutamic endopeptidase	-
SPB_RS09055 (SPB_1870)	-	1810276..1810728 (-)	453	WP_003104510.1	hypothetical protein	-
SPB_RS09060 (SPB_1871)	-	1810721..1810933 (-)	213	WP_003105344.1	helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 132 a.a.
• Molecular weight: 15171.37 Da
• Isoelectric Point: 7.7086

>NTDB_id=64564 SPB_RS09020 WP_003105619.1 1805609..1806007(-) (ssbA) [Streptococcus parauberis NCFD 2020]
MYNRVIMIGRLVADPQLIKTPKDKSVCRVSVAVNRRYKNAQGERQVDFVNLVLWGKLAESLVSYGSKGSLISLEGELRTR
RYEKDGKNCYVTEVLCHTFQLLESRAQRAMRENNMTNDLSDLVLDEEDDLPF

Nucleotide

• Length: 399 bp

>NTDB_id=64564 SPB_RS09020 WP_003105619.1 1805609..1806007(-) (ssbA) [Streptococcus parauberis NCFD 2020]
ATGTACAATAGAGTAATCATGATAGGACGCTTAGTTGCCGACCCACAATTAATCAAGACACCGAAAGATAAGTCGGTTTG
TCGTGTTTCAGTTGCTGTTAATCGTCGTTATAAAAATGCTCAAGGTGAAAGGCAAGTGGACTTTGTCAATTTAGTCTTAT
GGGGGAAACTTGCTGAATCACTAGTTTCCTATGGTAGTAAAGGCAGCCTAATTTCTTTGGAAGGCGAGTTGCGAACACGT
CGCTATGAAAAAGATGGGAAGAACTGTTATGTGACCGAGGTTTTGTGTCATACTTTTCAATTATTAGAAAGTCGTGCGCA
GCGAGCAATGCGTGAAAATAACATGACGAATGATCTCTCTGACTTAGTTCTTGATGAGGAAGATGACCTACCCTTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

3D structure

• AlphaFold DB: A0A0E2UAZ2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	74.242	100	0.742
ssbB/cilA	Streptococcus mitis NCTC 12261	71.212	100	0.712
ssbB/cilA	Streptococcus pneumoniae D39	69.697	100	0.697
ssbB/cilA	Streptococcus pneumoniae R6	69.697	100	0.697
ssbB/cilA	Streptococcus pneumoniae Rx1	69.697	100	0.697
ssbB/cilA	Streptococcus pneumoniae TIGR4	68.939	100	0.689
ssbB	Streptococcus sobrinus strain NIDR 6715-7	68.182	100	0.682
ssbB/cilA	Streptococcus mitis SK321	68.182	100	0.682
ssbB	Lactococcus lactis subsp. cremoris KW2	54.464	84.848	0.462
ssb	Latilactobacillus sakei subsp. sakei 23K	45.133	85.606	0.386
ssbB	Bacillus subtilis subsp. subtilis str. 168	45.283	80.303	0.364