Detailed information NTG0640228

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: FH104_RS10535
• Genome accession: NZ_CP090014
• Coordinates: 2107892..2108203 (+)
• Length: 103 a.a.
• NCBI ID: WP_017176238.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain acrlk
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2102892..2113203

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FH104_RS10505 (FH104_10480)	-	2103674..2103877 (+)	204	WP_017176233.1	YqgQ family protein	-
FH104_RS10510 (FH104_10485)	-	2103874..2104860 (+)	987	WP_002449785.1	ROK family glucokinase	-
FH104_RS10515 (FH104_10490)	-	2104860..2105183 (+)	324	WP_054105767.1	MTH1187 family thiamine-binding protein	-
FH104_RS10520 (FH104_10495)	-	2105185..2105811 (+)	627	WP_017176235.1	MBL fold metallo-hydrolase	-
FH104_RS10525 (FH104_10500)	comGA	2105862..2106836 (+)	975	WP_049415532.1	competence type IV pilus ATPase ComGA	Machinery gene
FH104_RS10530 (FH104_10505)	comGB	2106814..2107872 (+)	1059	WP_048681721.1	competence type IV pilus assembly protein ComGB	-
FH104_RS10535 (FH104_10510)	comGC	2107892..2108203 (+)	312	WP_017176238.1	competence type IV pilus major pilin ComGC	Machinery gene
FH104_RS10540 (FH104_10515)	comGD	2108193..2108627 (+)	435	WP_054105766.1	competence type IV pilus minor pilin ComGD	-
FH104_RS10545 (FH104_10520)	-	2108819..2109316 (+)	498	WP_017176240.1	competence protein ComG	-
FH104_RS10550 (FH104_10525)	-	2109481..2109990 (+)	510	WP_017176242.1	shikimate kinase	-
FH104_RS10555 (FH104_10530)	gcvT	2110185..2111276 (+)	1092	WP_017176243.1	glycine cleavage system aminomethyltransferase GcvT	-
FH104_RS10560 (FH104_10535)	gcvPA	2111293..2112645 (+)	1353	WP_019835697.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11400.52 Da
• Isoelectric Point: 9.1831

>NTDB_id=640228 FH104_RS10535 WP_017176238.1 2107892..2108203(+) (comGC) [Staphylococcus hominis strain acrlk]
MKKFKNKLKAFTLIEMLLVLLIISVLLILIIPNIAKQMSHIQSTGCEAQVKMVNSQIEAYTLKHNRVPNSIEDLVTEGFI
KQGQSSCKSGETISIKNGEAVAE

Nucleotide

• Length: 312 bp

>NTDB_id=640228 FH104_RS10535 WP_017176238.1 2107892..2108203(+) (comGC) [Staphylococcus hominis strain acrlk]
ATGAAAAAATTCAAAAATAAATTAAAAGCTTTTACTTTAATTGAGATGTTACTTGTACTATTAATAATTAGTGTTTTACT
CATTCTTATTATTCCGAATATAGCTAAACAAATGTCACATATTCAATCAACAGGATGTGAAGCACAAGTGAAAATGGTCA
ATAGTCAAATTGAAGCTTATACTTTAAAACATAATAGAGTTCCTAATTCTATTGAGGACTTAGTAACTGAAGGGTTTATA
AAACAAGGGCAATCATCTTGTAAGTCTGGAGAAACTATCAGTATTAAAAATGGAGAAGCAGTTGCAGAGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	79.412	99.029	0.786
comGC	Staphylococcus aureus MW2	79.412	99.029	0.786
comGC/cglC	Streptococcus mitis SK321	46.875	93.204	0.437
comGC/cglC	Streptococcus pneumoniae D39	45.833	93.204	0.427
comGC/cglC	Streptococcus pneumoniae R6	45.833	93.204	0.427
comGC/cglC	Streptococcus pneumoniae TIGR4	45.833	93.204	0.427
comGC/cglC	Streptococcus pneumoniae Rx1	45.833	93.204	0.427
comYC	Streptococcus mutans UA140	48.315	86.408	0.417
comYC	Streptococcus mutans UA159	48.315	86.408	0.417
comGC	Bacillus subtilis subsp. subtilis str. 168	44.211	92.233	0.408
comYC	Streptococcus gordonii str. Challis substr. CH1	47.727	85.437	0.408
comYC	Streptococcus suis isolate S10	46.512	83.495	0.388
comGC/cglC	Streptococcus mitis NCTC 12261	48.193	80.583	0.388