Detailed information NTG0639448

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: LXA49_RS10050
• Genome accession: NZ_CP089949
• Coordinates: 1942533..1942967 (-)
• Length: 144 a.a.
• NCBI ID: WP_033606693.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain SN75752
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1937533..1947967

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LXA49_RS10015 (LXA49_10000)	rnpA	1937950..1938321 (-)	372	WP_000739246.1	ribonuclease P protein component	-
LXA49_RS11180	-	1938338..1938469 (-)	132	WP_000768904.1	hypothetical protein	-
LXA49_RS10020 (LXA49_10005)	-	1938470..1939660 (-)	1191	WP_000167765.1	acetate kinase	-
LXA49_RS10025 (LXA49_10010)	comYH	1939711..1940664 (-)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
LXA49_RS10030 (LXA49_10015)	-	1940725..1941317 (-)	593	Protein_1976	methyltransferase domain-containing protein	-
LXA49_RS10035 (LXA49_10020)	comGG/cglG	1941420..1941866 (-)	447	WP_001809944.1	competence type IV pilus minor pilin ComGG	Machinery gene
LXA49_RS10040 (LXA49_10025)	comGF/cglF	1941844..1942305 (-)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
LXA49_RS10045 (LXA49_10030)	comGE/cglE	1942268..1942570 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
LXA49_RS10050 (LXA49_10035)	comGD/cglD	1942533..1942967 (-)	435	WP_033606693.1	competence type IV pilus minor pilin ComGD	Machinery gene
LXA49_RS10055 (LXA49_10040)	comGC/cglC	1942930..1943253 (-)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
LXA49_RS10060 (LXA49_10045)	comGB/cglB	1943255..1944271 (-)	1017	WP_078130737.1	competence type IV pilus assembly protein ComGB	Machinery gene
LXA49_RS10065 (LXA49_10050)	comGA/cglA/cilD	1944219..1945160 (-)	942	WP_000249536.1	competence type IV pilus ATPase ComGA	Machinery gene
LXA49_RS10070 (LXA49_10055)	-	1945236..1945601 (-)	366	WP_000286415.1	DUF1033 family protein	-
LXA49_RS10075 (LXA49_10060)	-	1945752..1946810 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15802.39 Da
• Isoelectric Point: 10.5150

>NTDB_id=639448 LXA49_RS10050 WP_033606693.1 1942533..1942967(-) (comGD/cglD) [Streptococcus pneumoniae strain SN75752]
MINKILVKSLKIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQM
ISNGSQKLPVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=639448 LXA49_RS10050 WP_033606693.1 1942533..1942967(-) (comGD/cglD) [Streptococcus pneumoniae strain SN75752]
ATGATAAACAAAATACTAGTCAAATCGTTAAAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCCGGCTCTGTCCAGTCCACTTTTGCAGCGGTAGAGGAACAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATG
ATTAGCAATGGCAGTCAAAAGTTGCCAGTCCCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	94.444	100	0.944
comGD/cglD	Streptococcus pneumoniae Rx1	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae D39	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae R6	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae TIGR4	97.744	92.361	0.903
comGD/cglD	Streptococcus mitis SK321	96.241	92.361	0.889
comYD	Streptococcus gordonii str. Challis substr. CH1	56.835	96.528	0.549
comYD	Streptococcus mutans UA140	49.612	89.583	0.444
comYD	Streptococcus mutans UA159	49.612	89.583	0.444