Detailed information NTG0603355

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: K8O95_RS00210
• Genome accession: NZ_CP082887
• Coordinates: 53573..54814 (+)
• Length: 413 a.a.
• NCBI ID: WP_026456598.1
• Uniprot ID: -
• Organism: Aeromonas enteropelogenes strain FDAARGOS_1459
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 48573..59814

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8O95_RS00185 (K8O95_00185)	ampD	48896..49477 (-)	582	WP_124238861.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
K8O95_RS00190 (K8O95_00190)	-	49501..49971 (+)	471	WP_223379341.1	TIGR02281 family clan AA aspartic protease	-
K8O95_RS00195 (K8O95_00195)	nadC	49975..50832 (+)	858	WP_223379343.1	carboxylating nicotinate-nucleotide diphosphorylase	-
K8O95_RS00200 (K8O95_00200)	-	51207..51647 (+)	441	WP_223379345.1	pilin	-
K8O95_RS00205 (K8O95_00205)	pilB	51638..53353 (+)	1716	WP_223379347.1	PilB family type IVa pilus assembly ATPase TapB	Machinery gene
K8O95_RS00210 (K8O95_00210)	pilC	53573..54814 (+)	1242	WP_026456598.1	type II secretion system F family protein	Machinery gene
K8O95_RS00215 (K8O95_00215)	pilD	54881..55756 (+)	876	WP_223379349.1	prepilin peptidase	Machinery gene
K8O95_RS00220 (K8O95_00220)	coaE	55760..56374 (+)	615	WP_223379351.1	dephospho-CoA kinase	-
K8O95_RS00225 (K8O95_00225)	zapD	56412..57134 (+)	723	WP_201980463.1	cell division protein ZapD	-
K8O95_RS00230 (K8O95_00230)	yacG	57144..57338 (+)	195	WP_026457308.1	DNA gyrase inhibitor YacG	-
K8O95_RS00235 (K8O95_00235)	mutT	57401..57796 (-)	396	WP_026457309.1	8-oxo-dGTP diphosphatase MutT	-

Sequence

Protein

• Length: 413 a.a.
• Molecular weight: 45329.45 Da
• Isoelectric Point: 9.8389

>NTDB_id=603355 K8O95_RS00210 WP_026456598.1 53573..54814(+) (pilC) [Aeromonas enteropelogenes strain FDAARGOS_1459]
MATLTNKNNAPKKVFAFRWSGVNRKGQKVSGELQADSINTVKAELRKQGVNVTKVAKKSQGLFSKGGAKIKPMDIAIVSR
QITTMLSAGVPLVQSLQIIARSHEKASMRELMGIVAADVETGTPMSEALRRHPRYFDALYCDLVEAGEQSGALETIYDRI
ATYREKSEALKSKIKKAMFYPTMVILVAIVVTSILLLFVIPQFEDIFKSFGAELPIFTQFVIGISRFMQNWWYVFFGGAA
LAIFLYVRAWRASQKVRDNTDKFVLTIPVVGMILHKAAMARFARTLSTTFSAGIPLVDALISAAGASGNYVYRTAVMAIR
NEVVAGMQINVAMRTVDLFPDMVIQMVMIGEESGAIDDMLSKVATIFEQEVDDLVDGLTSLLEPLIMVVLGVLVGGMVIA
MYLPIFKLGDVVG

Nucleotide

• Length: 1242 bp

>NTDB_id=603355 K8O95_RS00210 WP_026456598.1 53573..54814(+) (pilC) [Aeromonas enteropelogenes strain FDAARGOS_1459]
ATGGCAACGCTAACCAACAAGAATAATGCCCCCAAAAAAGTCTTCGCGTTTCGCTGGAGCGGGGTCAACCGCAAGGGCCA
GAAAGTCTCTGGTGAACTCCAGGCCGACAGCATCAATACCGTCAAGGCCGAGCTGCGCAAGCAGGGGGTCAATGTCACCA
AGGTGGCCAAGAAATCCCAGGGGCTGTTCTCCAAGGGTGGCGCCAAGATCAAGCCGATGGATATCGCCATCGTCTCGCGC
CAGATCACCACCATGCTCTCCGCCGGCGTGCCGCTGGTACAGAGCCTGCAGATCATCGCCCGCAGCCATGAAAAAGCCTC
GATGCGCGAGCTGATGGGGATCGTCGCCGCCGATGTGGAGACCGGCACCCCCATGTCGGAGGCGCTGCGCCGCCATCCCC
GCTACTTCGACGCCCTCTACTGCGATCTGGTGGAGGCGGGCGAGCAGTCCGGCGCACTGGAGACCATCTACGATCGTATC
GCCACCTATCGGGAAAAGTCGGAAGCGCTCAAGTCCAAGATCAAGAAGGCGATGTTCTACCCCACCATGGTCATCCTGGT
GGCCATCGTCGTCACCTCAATCCTGCTGCTGTTCGTCATCCCCCAGTTCGAGGACATCTTCAAGAGCTTCGGCGCCGAGC
TGCCCATCTTCACCCAGTTCGTCATCGGCATCTCCCGCTTCATGCAGAATTGGTGGTATGTCTTCTTCGGCGGGGCGGCG
CTCGCCATCTTCCTCTACGTCCGCGCCTGGCGCGCTTCTCAAAAGGTGAGAGACAACACCGACAAGTTCGTGCTGACCAT
CCCGGTGGTCGGCATGATACTGCACAAGGCGGCCATGGCCCGCTTTGCCCGCACCCTCTCCACCACCTTCTCGGCCGGTA
TCCCATTGGTGGATGCACTCATCTCGGCGGCGGGGGCCTCCGGCAACTATGTCTATCGCACTGCCGTCATGGCCATTCGC
AACGAGGTGGTAGCGGGCATGCAAATCAACGTGGCGATGCGCACCGTGGATCTCTTCCCCGACATGGTGATCCAGATGGT
GATGATCGGCGAGGAGTCCGGCGCCATCGATGATATGCTCTCCAAGGTCGCCACCATCTTCGAACAGGAGGTGGATGATC
TGGTAGATGGCCTCACCAGCCTGCTGGAACCCCTCATCATGGTGGTGCTCGGGGTGCTGGTCGGCGGCATGGTGATCGCC
ATGTACCTGCCCATCTTCAAGCTTGGCGATGTCGTGGGTTGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (282-404)

• Type II secretion system (T2SS), protein F (T2SSF) (79-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Pseudomonas stutzeri DSM 10701	57.828	95.884	0.554
pilC	Acinetobacter baumannii D1279779	53.75	96.852	0.521
pilC	Acinetobacter baylyi ADP1	53.634	96.61	0.518
pilC	Legionella pneumophila strain ERS1305867	50.614	98.547	0.499
pilC	Vibrio cholerae strain A1552	47.118	96.61	0.455
pilC	Vibrio campbellii strain DS40M4	46.734	96.368	0.45
pilG	Neisseria gonorrhoeae MS11	40.247	98.063	0.395
pilG	Neisseria meningitidis 44/76-A	40	98.063	0.392
pilC	Thermus thermophilus HB27	38.5	96.852	0.373