Detailed information NTG0603356

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: K8O95_RS00215
• Genome accession: NZ_CP082887
• Coordinates: 54881..55756 (+)
• Length: 291 a.a.
• NCBI ID: WP_223379349.1
• Uniprot ID: -
• Organism: Aeromonas enteropelogenes strain FDAARGOS_1459
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 49881..60756

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8O95_RS00195 (K8O95_00195)	nadC	49975..50832 (+)	858	WP_223379343.1	carboxylating nicotinate-nucleotide diphosphorylase	-
K8O95_RS00200 (K8O95_00200)	-	51207..51647 (+)	441	WP_223379345.1	pilin	-
K8O95_RS00205 (K8O95_00205)	pilB	51638..53353 (+)	1716	WP_223379347.1	PilB family type IVa pilus assembly ATPase TapB	Machinery gene
K8O95_RS00210 (K8O95_00210)	pilC	53573..54814 (+)	1242	WP_026456598.1	type II secretion system F family protein	Machinery gene
K8O95_RS00215 (K8O95_00215)	pilD	54881..55756 (+)	876	WP_223379349.1	prepilin peptidase	Machinery gene
K8O95_RS00220 (K8O95_00220)	coaE	55760..56374 (+)	615	WP_223379351.1	dephospho-CoA kinase	-
K8O95_RS00225 (K8O95_00225)	zapD	56412..57134 (+)	723	WP_201980463.1	cell division protein ZapD	-
K8O95_RS00230 (K8O95_00230)	yacG	57144..57338 (+)	195	WP_026457308.1	DNA gyrase inhibitor YacG	-
K8O95_RS00235 (K8O95_00235)	mutT	57401..57796 (-)	396	WP_026457309.1	8-oxo-dGTP diphosphatase MutT	-
K8O95_RS00240 (K8O95_00240)	secA	57887..60607 (-)	2721	WP_223379353.1	preprotein translocase subunit SecA	-

Sequence

Protein

• Length: 291 a.a.
• Molecular weight: 32283.63 Da
• Isoelectric Point: 6.8285

>NTDB_id=603356 K8O95_RS00215 WP_223379349.1 54881..55756(+) (pilD) [Aeromonas enteropelogenes strain FDAARGOS_1459]
MTLLIELAHGLPLLYLSLVFLFSLMIGSFLNVVIHRLPIMLEREWQAEYHGYFETQTPNSDPAERYNLMVPRSACPHCGH
AITAVENIPLLSWLWLRGRCRECQAPISARYPLVELLTALLSVAVATILTPGWGVLAALLLTWVLVTLTFIDLDKMLLPD
QLTLPLLWGGLLFNLAGGFVPLADAVIGAMAGYLVLWSLYWAFKLLTGKEGMGYGDFKLLAALGAWLGWQSLPIILLLSS
LVGAIIGITLIALRKHHQGKPIPFGPYLAIAGWIALLWGDTITRWYLEMVL

Nucleotide

• Length: 876 bp

>NTDB_id=603356 K8O95_RS00215 WP_223379349.1 54881..55756(+) (pilD) [Aeromonas enteropelogenes strain FDAARGOS_1459]
ATGACACTTCTTATCGAGCTGGCGCACGGCTTGCCCTTGCTCTATCTCTCCCTGGTTTTTCTCTTCTCTCTGATGATCGG
CAGCTTCCTCAACGTGGTGATCCACCGCCTCCCCATCATGCTGGAGCGGGAGTGGCAGGCCGAATATCACGGCTACTTCG
AGACACAAACGCCAAACAGCGATCCGGCTGAACGCTACAACCTGATGGTGCCGCGTTCCGCCTGCCCCCACTGCGGCCAT
GCCATCACGGCCGTCGAGAATATCCCGCTCCTGAGCTGGCTCTGGCTCAGGGGCCGTTGCCGGGAGTGTCAGGCCCCCAT
CTCGGCCCGTTATCCCCTGGTGGAATTGCTGACAGCCCTGCTCTCGGTAGCGGTAGCCACGATCCTGACGCCGGGCTGGG
GTGTGCTGGCAGCCCTGCTGCTGACCTGGGTGCTGGTGACGCTCACCTTTATCGATCTGGACAAGATGCTGCTACCTGAC
CAGCTTACCCTGCCACTGCTGTGGGGCGGGTTGCTGTTCAATCTGGCAGGGGGATTCGTTCCGCTGGCCGACGCGGTGAT
CGGGGCCATGGCCGGCTATCTGGTACTGTGGAGCCTCTACTGGGCCTTCAAGCTGCTGACCGGCAAGGAGGGGATGGGAT
ATGGCGATTTCAAGCTGCTGGCGGCGCTCGGTGCCTGGCTGGGCTGGCAGTCCCTGCCCATCATACTGCTGCTCTCCTCC
CTGGTGGGCGCCATCATCGGCATCACGCTGATCGCGCTGCGCAAGCACCATCAGGGCAAGCCCATCCCCTTTGGCCCCTA
TCTGGCCATCGCGGGCTGGATCGCCCTGCTGTGGGGCGATACCATCACCCGCTGGTATCTCGAAATGGTGCTCTGA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-127)

• Type IV leader peptidase family (Peptidase_A24) (140-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	60.839	98.282	0.598
pilD	Vibrio campbellii strain DS40M4	56.25	98.969	0.557
pilD	Acinetobacter baumannii D1279779	53.763	95.876	0.515
pilD	Acinetobacter nosocomialis M2	53.763	95.876	0.515
pilD	Neisseria gonorrhoeae MS11	49.064	91.753	0.45