Detailed information
Bioinformatically predicted
Overview
| Name | Cj0011c | Type | Machinery gene |
| Locus tag | K8O82_RS06235 | Genome accession | NZ_CP082871 |
| Coordinates | 1277882..1278133 (-) | Length | 83 a.a. |
| NCBI ID | WP_041570433.1 | Uniprot ID | - |
| Organism | Campylobacter hominis strain FDAARGOS_1467 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1272882..1283133
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8O82_RS06220 (K8O82_06185) | - | 1273787..1274287 (-) | 501 | WP_011991535.1 | hypothetical protein | - |
| K8O82_RS06225 (K8O82_06190) | uvrA | 1274472..1277282 (+) | 2811 | WP_041570552.1 | excinuclease ABC subunit UvrA | - |
| K8O82_RS08655 | - | 1277358..1277516 (+) | 159 | WP_396021486.1 | hypothetical protein | - |
| K8O82_RS06235 (K8O82_06200) | Cj0011c | 1277882..1278133 (-) | 252 | WP_041570433.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| K8O82_RS06240 (K8O82_06205) | - | 1278458..1278718 (-) | 261 | WP_041570432.1 | hypothetical protein | - |
| K8O82_RS06245 (K8O82_06210) | - | 1278715..1279386 (-) | 672 | WP_011991530.1 | hypothetical protein | - |
| K8O82_RS08660 (K8O82_06215) | - | 1279370..1279492 (-) | 123 | WP_172462805.1 | LPD23 domain-containing protein | - |
| K8O82_RS06255 (K8O82_06220) | - | 1279495..1280130 (-) | 636 | WP_011991529.1 | hypothetical protein | - |
| K8O82_RS06260 (K8O82_06225) | - | 1280647..1281741 (+) | 1095 | WP_011991528.1 | adenine-specific methyltransferase EcoRI family protein | - |
| K8O82_RS06265 (K8O82_06230) | - | 1281752..1282807 (+) | 1056 | WP_011991527.1 | adenine-specific methyltransferase EcoRI family protein | - |
Sequence
Protein
Download Length: 83 a.a. Molecular weight: 9500.16 Da Isoelectric Point: 9.5698
>NTDB_id=603270 K8O82_RS06235 WP_041570433.1 1277882..1278133(-) (Cj0011c) [Campylobacter hominis strain FDAARGOS_1467]
MKRLLLLFVFSFSLLFGAININTASKEELMTLKGIGETTAEAIIEYRKENKFTKIEDIKNVKGIGDKKFESIKEDIEIKD
SKK
MKRLLLLFVFSFSLLFGAININTASKEELMTLKGIGETTAEAIIEYRKENKFTKIEDIKNVKGIGDKKFESIKEDIEIKD
SKK
Nucleotide
Download Length: 252 bp
>NTDB_id=603270 K8O82_RS06235 WP_041570433.1 1277882..1278133(-) (Cj0011c) [Campylobacter hominis strain FDAARGOS_1467]
ATGAAAAGATTATTGTTATTATTTGTTTTTAGTTTTAGTTTGTTGTTTGGTGCTATAAATATAAACACTGCTTCCAAGGA
AGAACTTATGACTCTTAAAGGTATTGGAGAGACTACAGCAGAAGCCATAATAGAATACAGAAAAGAAAATAAATTTACAA
AAATAGAAGATATTAAAAATGTAAAAGGCATAGGTGATAAGAAATTTGAATCAATAAAAGAAGATATTGAGATTAAAGAT
AGCAAGAAATAA
ATGAAAAGATTATTGTTATTATTTGTTTTTAGTTTTAGTTTGTTGTTTGGTGCTATAAATATAAACACTGCTTCCAAGGA
AGAACTTATGACTCTTAAAGGTATTGGAGAGACTACAGCAGAAGCCATAATAGAATACAGAAAAGAAAATAAATTTACAA
AAATAGAAGATATTAAAAATGTAAAAGGCATAGGTGATAAGAAATTTGAATCAATAAAAGAAGATATTGAGATTAAAGAT
AGCAAGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
62.821 |
93.976 |
0.59 |
| comEA | Bacillus subtilis subsp. subtilis str. 168 |
56.452 |
74.699 |
0.422 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
42.683 |
98.795 |
0.422 |
| comE | Neisseria gonorrhoeae MS11 |
41.975 |
97.59 |
0.41 |
| comE | Neisseria gonorrhoeae MS11 |
41.975 |
97.59 |
0.41 |
| comE | Neisseria gonorrhoeae MS11 |
41.975 |
97.59 |
0.41 |
| comE | Neisseria gonorrhoeae MS11 |
41.975 |
97.59 |
0.41 |
| comEA | Legionella pneumophila strain ERS1305867 |
46.269 |
80.723 |
0.373 |
| comEA | Legionella pneumophila str. Paris |
46.269 |
80.723 |
0.373 |
| comEA | Vibrio cholerae strain A1552 |
62 |
60.241 |
0.373 |
| comEA | Vibrio cholerae C6706 |
62 |
60.241 |
0.373 |
| comEA | Acinetobacter baumannii D1279779 |
49.206 |
75.904 |
0.373 |
| comEA | Acinetobacter baumannii strain A118 |
47.619 |
75.904 |
0.361 |