Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   M5C73_RS02150 Genome accession   NZ_CP098790
Coordinates   427345..428127 (+) Length   260 a.a.
NCBI ID   WP_010905316.1    Uniprot ID   Q9CIG2
Organism   Lactococcus lactis strain WiKim0124     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 422345..433127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5C73_RS02125 (M5C73_02125) vicX 422370..423182 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  M5C73_RS02130 (M5C73_02130) vicK 423353..424795 (-) 1443 WP_012897229.1 cell wall metabolism sensor histidine kinase WalK Regulator
  M5C73_RS02135 (M5C73_02135) yycF 424788..425489 (-) 702 WP_003131580.1 response regulator YycF -
  M5C73_RS02140 (M5C73_02140) tmk 425667..426302 (+) 636 WP_015425847.1 dTMP kinase -
  M5C73_RS02145 (M5C73_02145) - 426433..427293 (+) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  M5C73_RS02150 (M5C73_02150) yaaT 427345..428127 (+) 783 WP_010905316.1 stage 0 sporulation family protein Regulator
  M5C73_RS02155 (M5C73_02155) yabA 428120..428446 (+) 327 WP_003131570.1 DNA replication initiation control protein YabA -
  M5C73_RS02160 (M5C73_02160) rsmI 428446..429321 (+) 876 WP_010905318.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  M5C73_RS02165 (M5C73_02165) - 429398..429589 (-) 192 WP_012897234.1 hypothetical protein -
  M5C73_RS02170 (M5C73_02170) mvk 429652..430584 (-) 933 WP_003131564.1 mevalonate kinase -
  M5C73_RS02175 (M5C73_02175) mvaD 430890..431846 (+) 957 WP_058204089.1 diphosphomevalonate decarboxylase -
  M5C73_RS02180 (M5C73_02180) - 431833..432822 (+) 990 WP_252160231.1 mevalonate kinase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29803.27 Da        Isoelectric Point: 6.0566

>NTDB_id=601131 M5C73_RS02150 WP_010905316.1 427345..428127(+) (yaaT) [Lactococcus lactis strain WiKim0124]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=601131 M5C73_RS02150 WP_010905316.1 427345..428127(+) (yaaT) [Lactococcus lactis strain WiKim0124]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388