Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   Sta0113_RS02485 Genome accession   NZ_CP080457
Coordinates   510008..510904 (-) Length   298 a.a.
NCBI ID   WP_049379408.1    Uniprot ID   -
Organism   Staphylococcus hominis subsp. hominis strain WiKim0113     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 505008..515904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Sta0113_RS02470 (Sta0113_02465) - 506314..507078 (-) 765 WP_049382135.1 DUF4064 domain-containing protein -
  Sta0113_RS02475 (Sta0113_02470) - 507170..509125 (-) 1956 WP_049379410.1 FtsX-like permease family protein -
  Sta0113_RS02480 (Sta0113_02475) - 509127..509876 (-) 750 WP_049379409.1 ABC transporter ATP-binding protein -
  Sta0113_RS02485 (Sta0113_02480) braS 510008..510904 (-) 897 WP_049379408.1 sensor histidine kinase Regulator
  Sta0113_RS02490 (Sta0113_02485) braR 510910..511575 (-) 666 WP_002454771.1 response regulator transcription factor Regulator
  Sta0113_RS02495 (Sta0113_02490) - 511588..511755 (-) 168 WP_002488268.1 hypothetical protein -
  Sta0113_RS02500 (Sta0113_02495) - 511926..512099 (-) 174 WP_176743953.1 hypothetical protein -
  Sta0113_RS02505 (Sta0113_02500) - 512481..513953 (+) 1473 WP_145436963.1 alkaline phosphatase -
  Sta0113_RS02510 (Sta0113_02505) - 514067..515011 (-) 945 WP_145436964.1 LCP family protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34681.36 Da        Isoelectric Point: 6.8855

>NTDB_id=592963 Sta0113_RS02485 WP_049379408.1 510008..510904(-) (braS) [Staphylococcus hominis subsp. hominis strain WiKim0113]
MLKAFIKSIRHQMMIVALFLLLFLVIFFLFNLPFNAFFLGMAIILFIMIIFWLIQLSGFQEAMSLKEEVAHLEDELQRVK
NEQAAYQVNVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVAINDL
VKPLIMKYSIQFIDQKTNIHYTRCEDEVLTDVQWCTIMIEQILNNALKYARGKDIWITFNNENRVLSIRDNGVGISKADL
PKIFDKGYSGYNGRLHQHSSGIGLFIVKHISAHLHHKIEVSSTLNEGTTFDIHFPENN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=592963 Sta0113_RS02485 WP_049379408.1 510008..510904(-) (braS) [Staphylococcus hominis subsp. hominis strain WiKim0113]
ATGTTAAAAGCATTTATAAAATCGATACGTCATCAAATGATGATAGTAGCATTATTTCTATTACTTTTTTTGGTGATTTT
TTTTCTTTTTAATTTGCCTTTCAACGCATTCTTTCTAGGTATGGCAATTATTCTTTTCATAATGATTATTTTTTGGTTGA
TTCAACTTAGTGGCTTTCAAGAAGCAATGTCTTTAAAAGAAGAAGTTGCTCACTTAGAAGATGAATTACAACGTGTAAAA
AATGAACAAGCTGCATATCAAGTCAACGTTGAGAACTATTTTCTAACATGGGTGCATCAAATGAAGACACCTATTACCGC
TTCAAAACTCCTTTTAGAAAGAAATGAAGATAATGTAGTGAATCGCGTGCGTCAAGAAATTATACAAATTGATAACTATA
CGAGTCTTGCACTTAGCTATTTAAAATTAATGAATCAAGAAACGGATATGTCCTTTTCGAAAGTAGCCATTAATGATCTC
GTTAAACCTCTTATTATGAAATATTCGATTCAATTCATCGACCAAAAAACAAACATTCATTACACACGTTGTGAAGATGA
AGTACTTACTGATGTTCAATGGTGTACAATCATGATAGAACAAATTCTTAATAATGCTTTGAAATATGCACGTGGTAAAG
ACATTTGGATTACGTTTAACAACGAAAATCGTGTGCTATCTATACGAGATAATGGTGTAGGAATTAGTAAAGCCGATCTT
CCCAAAATCTTCGATAAAGGCTACTCGGGCTATAACGGAAGACTTCATCAACATTCAAGTGGCATTGGATTATTTATTGT
TAAACATATATCGGCACATTTACATCATAAAATAGAAGTGTCTTCAACACTCAATGAAGGAACTACATTTGACATACATT
TCCCAGAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(195-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

59.727

98.322

0.587