Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | KZW86_RS05825 | Genome accession | NZ_CP080249 |
| Coordinates | 1161203..1161631 (+) | Length | 142 a.a. |
| NCBI ID | WP_031795050.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NV_1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1156203..1166631
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZW86_RS05770 (KZW86_05730) | - | 1156688..1156903 (+) | 216 | WP_070051787.1 | transcriptional regulator | - |
| KZW86_RS05775 (KZW86_05735) | - | 1156919..1157080 (+) | 162 | WP_172972928.1 | hypothetical protein | - |
| KZW86_RS05780 (KZW86_05740) | - | 1157085..1157348 (-) | 264 | WP_014533247.1 | CRISPR-associated protein Cas2 | - |
| KZW86_RS05785 (KZW86_05745) | - | 1157792..1157977 (+) | 186 | WP_238565730.1 | helix-turn-helix transcriptional regulator | - |
| KZW86_RS05790 (KZW86_05750) | - | 1157979..1158731 (+) | 753 | WP_001148607.1 | phage antirepressor KilAC domain-containing protein | - |
| KZW86_RS05795 (KZW86_05755) | - | 1158924..1159154 (-) | 231 | WP_000395457.1 | hypothetical protein | - |
| KZW86_RS05800 (KZW86_05760) | - | 1159334..1159495 (+) | 162 | WP_153906701.1 | DUF1270 domain-containing protein | - |
| KZW86_RS05805 (KZW86_05765) | - | 1159589..1159849 (+) | 261 | WP_153906700.1 | DUF1108 family protein | - |
| KZW86_RS05810 (KZW86_05770) | - | 1159857..1160093 (+) | 237 | WP_000802315.1 | hypothetical protein | - |
| KZW86_RS05815 (KZW86_05775) | - | 1160086..1160565 (+) | 480 | WP_000002513.1 | siphovirus Gp157 family protein | - |
| KZW86_RS05820 (KZW86_05780) | - | 1160565..1161203 (+) | 639 | WP_001043061.1 | ERF family protein | - |
| KZW86_RS05825 (KZW86_05785) | ssbA | 1161203..1161631 (+) | 429 | WP_031795050.1 | single-stranded DNA-binding protein | Machinery gene |
| KZW86_RS05830 (KZW86_05790) | - | 1161645..1162319 (+) | 675 | WP_031795051.1 | putative HNHc nuclease | - |
| KZW86_RS05835 (KZW86_05795) | - | 1162429..1163088 (-) | 660 | WP_016028252.1 | hypothetical protein | - |
| KZW86_RS05840 (KZW86_05800) | - | 1163134..1163904 (+) | 771 | WP_000190226.1 | conserved phage C-terminal domain-containing protein | - |
| KZW86_RS05845 (KZW86_05805) | - | 1163914..1164687 (+) | 774 | WP_000803028.1 | ATP-binding protein | - |
| KZW86_RS05850 (KZW86_05810) | - | 1164681..1164839 (+) | 159 | WP_000256589.1 | hypothetical protein | - |
| KZW86_RS05855 (KZW86_05815) | - | 1164852..1165073 (+) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| KZW86_RS05860 (KZW86_05820) | - | 1165083..1165622 (+) | 540 | WP_234769214.1 | RusA family crossover junction endodeoxyribonuclease | - |
| KZW86_RS05865 (KZW86_05825) | - | 1165622..1165807 (+) | 186 | WP_001187261.1 | DUF3113 family protein | - |
| KZW86_RS05870 (KZW86_05830) | - | 1165808..1166113 (+) | 306 | WP_000101252.1 | hypothetical protein | - |
| KZW86_RS05875 (KZW86_05835) | - | 1166241..1166600 (+) | 360 | WP_234769215.1 | SA1788 family PVL leukocidin-associated protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 16047.63 Da Isoelectric Point: 5.8698
>NTDB_id=591663 KZW86_RS05825 WP_031795050.1 1161203..1161631(+) (ssbA) [Staphylococcus aureus strain NV_1]
MLNRVVLVGRLTKDPEFRTTPNGVSVATFTLAVNRTFTNAQGEREADFINCVTFRKQADNVNNYLSKGSLAGVDGRLQSR
SYENQEGRRVFVTEVVCDSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNTTAITDDDLPF
MLNRVVLVGRLTKDPEFRTTPNGVSVATFTLAVNRTFTNAQGEREADFINCVTFRKQADNVNNYLSKGSLAGVDGRLQSR
SYENQEGRRVFVTEVVCDSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNTTAITDDDLPF
Nucleotide
Download Length: 429 bp
>NTDB_id=591663 KZW86_RS05825 WP_031795050.1 1161203..1161631(+) (ssbA) [Staphylococcus aureus strain NV_1]
ATGTTAAACAGAGTAGTTTTAGTAGGACGCTTAACAAAAGACCCAGAATTCAGAACAACGCCAAACGGTGTAAGTGTAGC
TACTTTCACTCTTGCAGTCAATAGAACATTCACAAACGCACAAGGAGAACGTGAGGCAGATTTTATTAATTGTGTAACTT
TTAGAAAACAAGCAGATAACGTGAATAACTATTTATCAAAAGGATCATTAGCTGGTGTTGACGGACGCCTACAATCACGT
AGTTATGAAAATCAAGAAGGTCGTCGTGTATTCGTTACCGAAGTTGTATGTGACAGTGTCCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAATACCACTG
CGATTACTGATGATGACTTACCGTTCTGA
ATGTTAAACAGAGTAGTTTTAGTAGGACGCTTAACAAAAGACCCAGAATTCAGAACAACGCCAAACGGTGTAAGTGTAGC
TACTTTCACTCTTGCAGTCAATAGAACATTCACAAACGCACAAGGAGAACGTGAGGCAGATTTTATTAATTGTGTAACTT
TTAGAAAACAAGCAGATAACGTGAATAACTATTTATCAAAAGGATCATTAGCTGGTGTTGACGGACGCCTACAATCACGT
AGTTATGAAAATCAAGAAGGTCGTCGTGTATTCGTTACCGAAGTTGTATGTGACAGTGTCCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAATACCACTG
CGATTACTGATGATGACTTACCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.302 |
100 |
0.718 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.606 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
60.377 |
74.648 |
0.451 |
| ssbA | Streptococcus mutans UA159 |
40.141 |
100 |
0.401 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
39.86 |
100 |
0.401 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
39.437 |
100 |
0.394 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
39.437 |
100 |
0.394 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
38.732 |
100 |
0.387 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
38.732 |
100 |
0.387 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
38.732 |
100 |
0.387 |
| ssbB/cilA | Streptococcus mitis SK321 |
38.732 |
100 |
0.387 |