Detailed information NTG0588950

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: KX728_RS00825
• Genome accession: NZ_CP079724
• Coordinates: 158769..159203 (+)
• Length: 144 a.a.
• NCBI ID: WP_215805166.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain 34
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 153769..164203

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KX728_RS00800 (KX728_00800)	nagA	154844..155995 (+)	1152	WP_215805169.1	N-acetylglucosamine-6-phosphate deacetylase	-
KX728_RS00805 (KX728_00805)	-	156147..156512 (+)	366	WP_000286399.1	DUF1033 family protein	-
KX728_RS00810 (KX728_00810)	comGA/cglA/cilD	156576..157517 (+)	942	WP_215805168.1	competence type IV pilus ATPase ComGA	Machinery gene
KX728_RS00815 (KX728_00815)	comGB/cglB	157465..158481 (+)	1017	WP_215805178.1	competence type IV pilus assembly protein ComGB	Machinery gene
KX728_RS00820 (KX728_00820)	comGC/cglC	158483..158806 (+)	324	WP_215805167.1	competence type IV pilus major pilin ComGC	Machinery gene
KX728_RS00825 (KX728_00825)	comGD/cglD	158769..159203 (+)	435	WP_215805166.1	competence type IV pilus minor pilin ComGD	Machinery gene
KX728_RS00830 (KX728_00830)	comGE/cglE	159166..159468 (+)	303	WP_000413364.1	competence type IV pilus minor pilin ComGE	Machinery gene
KX728_RS00835 (KX728_00835)	comGF/cglF	159431..159892 (+)	462	WP_215805165.1	competence type IV pilus minor pilin ComGF	Machinery gene
KX728_RS00840 (KX728_00840)	comGG/cglG	159870..160283 (+)	414	WP_215805164.1	competence type IV pilus minor pilin ComGG	Machinery gene
KX728_RS00845 (KX728_00845)	-	160316..160906 (+)	591	Protein_149	class I SAM-dependent methyltransferase	-
KX728_RS00850 (KX728_00850)	comYH	160965..161918 (+)	954	WP_215805163.1	class I SAM-dependent methyltransferase	Machinery gene
KX728_RS00855 (KX728_00855)	-	161969..163159 (+)	1191	WP_215805162.1	acetate kinase	-
KX728_RS00860 (KX728_00860)	rnpA	163309..163680 (+)	372	WP_000748120.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15845.32 Da
• Isoelectric Point: 10.5150

>NTDB_id=588950 KX728_RS00825 WP_215805166.1 158769..159203(+) (comGD/cglD) [Streptococcus oralis strain 34]
MQNKKQVKLLQIKAFTMLESLLVLGLVSILALGLSGSVQSSFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQT
ISNGSQKLTVPKGIQAPSGQSIIFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=588950 KX728_RS00825 WP_215805166.1 158769..159203(+) (comGD/cglD) [Streptococcus oralis strain 34]
ATGCAAAACAAAAAACAAGTCAAACTGTTGCAGATTAAGGCCTTTACCATGCTGGAAAGTCTCCTTGTTTTAGGACTTGT
GAGTATCCTTGCTTTGGGCTTGTCCGGTTCTGTTCAGTCCAGTTTTGCAGCGGTGGAAGAACAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACGCAAAAACGCAGTGTAGCCAGTCAGCAAAAGACCAGTCTAAACTTAGATGGGCAAACG
ATCAGTAACGGCAGTCAAAAGTTGACCGTTCCTAAAGGGATTCAGGCACCATCTGGACAAAGCATTATATTTGACCGAGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACTAAAAATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	94.444	100	0.944
comGD/cglD	Streptococcus pneumoniae Rx1	96.992	92.361	0.896
comGD/cglD	Streptococcus pneumoniae D39	96.992	92.361	0.896
comGD/cglD	Streptococcus pneumoniae R6	96.992	92.361	0.896
comGD/cglD	Streptococcus pneumoniae TIGR4	96.241	92.361	0.889
comGD/cglD	Streptococcus mitis SK321	96.241	92.361	0.889
comYD	Streptococcus gordonii str. Challis substr. CH1	58.14	89.583	0.521
comYD	Streptococcus mutans UA140	48.837	89.583	0.437
comYD	Streptococcus mutans UA159	48.837	89.583	0.437