Detailed information NTG0588952

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: KX728_RS00835
• Genome accession: NZ_CP079724
• Coordinates: 159431..159892 (+)
• Length: 153 a.a.
• NCBI ID: WP_215805165.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain 34
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 154431..164892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KX728_RS00800 (KX728_00800)	nagA	154844..155995 (+)	1152	WP_215805169.1	N-acetylglucosamine-6-phosphate deacetylase	-
KX728_RS00805 (KX728_00805)	-	156147..156512 (+)	366	WP_000286399.1	DUF1033 family protein	-
KX728_RS00810 (KX728_00810)	comGA/cglA/cilD	156576..157517 (+)	942	WP_215805168.1	competence type IV pilus ATPase ComGA	Machinery gene
KX728_RS00815 (KX728_00815)	comGB/cglB	157465..158481 (+)	1017	WP_215805178.1	competence type IV pilus assembly protein ComGB	Machinery gene
KX728_RS00820 (KX728_00820)	comGC/cglC	158483..158806 (+)	324	WP_215805167.1	competence type IV pilus major pilin ComGC	Machinery gene
KX728_RS00825 (KX728_00825)	comGD/cglD	158769..159203 (+)	435	WP_215805166.1	competence type IV pilus minor pilin ComGD	Machinery gene
KX728_RS00830 (KX728_00830)	comGE/cglE	159166..159468 (+)	303	WP_000413364.1	competence type IV pilus minor pilin ComGE	Machinery gene
KX728_RS00835 (KX728_00835)	comGF/cglF	159431..159892 (+)	462	WP_215805165.1	competence type IV pilus minor pilin ComGF	Machinery gene
KX728_RS00840 (KX728_00840)	comGG/cglG	159870..160283 (+)	414	WP_215805164.1	competence type IV pilus minor pilin ComGG	Machinery gene
KX728_RS00845 (KX728_00845)	-	160316..160906 (+)	591	Protein_149	class I SAM-dependent methyltransferase	-
KX728_RS00850 (KX728_00850)	comYH	160965..161918 (+)	954	WP_215805163.1	class I SAM-dependent methyltransferase	Machinery gene
KX728_RS00855 (KX728_00855)	-	161969..163159 (+)	1191	WP_215805162.1	acetate kinase	-
KX728_RS00860 (KX728_00860)	rnpA	163309..163680 (+)	372	WP_000748120.1	ribonuclease P protein component	-
KX728_RS00865 (KX728_00865)	-	163655..164482 (+)	828	WP_000728097.1	membrane protein insertase YidC	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17865.48 Da
• Isoelectric Point: 9.7631

>NTDB_id=588952 KX728_RS00835 WP_215805165.1 159431..159892(+) (comGF/cglF) [Streptococcus oralis strain 34]
MVQRSYSTLKSSKVRAFTLLESLIALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELERSQFEKVEGN
RLYMKQDGKDISIGKSKSDDFRKTDTSGRGYQPMVYGLKSAQITEENQLVRFRFQFQKGLEREFIYRVEKTKS

Nucleotide

• Length: 462 bp

>NTDB_id=588952 KX728_RS00835 WP_215805165.1 159431..159892(+) (comGF/cglF) [Streptococcus oralis strain 34]
ATGGTTCAGAGAAGTTACTCGACCTTAAAGAGCAGTAAGGTAAGAGCGTTCACTCTTTTAGAATCTCTGATTGCCCTTAT
CGTCATTAGCGGAGGCTTGCTCCTCTTTCAGGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGTTACCAGCAGCAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGATCAGCTGGAGGCAGAGTTAGAGCGTTCGCAGTTTGAAAAGGTAGAAGGCAAT
CGCCTCTACATGAAACAAGATGGTAAGGATATCTCTATAGGGAAGTCTAAATCGGATGATTTTCGAAAAACGGATACCAG
CGGACGGGGCTATCAGCCGATGGTTTATGGACTCAAATCAGCTCAAATTACAGAGGAAAATCAATTGGTTCGCTTTCGTT
TCCAATTTCAAAAGGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAACAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis SK321	90.196	100	0.902
comGF/cglF	Streptococcus mitis NCTC 12261	88.889	100	0.889
comGF/cglF	Streptococcus pneumoniae Rx1	87.582	100	0.876
comGF/cglF	Streptococcus pneumoniae D39	87.582	100	0.876
comGF/cglF	Streptococcus pneumoniae R6	87.582	100	0.876
comGF/cglF	Streptococcus pneumoniae TIGR4	87.582	100	0.876
comGF	Lactococcus lactis subsp. cremoris KW2	41.429	91.503	0.379