Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | KW115_RS15415 | Genome accession | NZ_CP079095 |
| Coordinates | 3186493..3186906 (+) | Length | 137 a.a. |
| NCBI ID | WP_218806547.1 | Uniprot ID | - |
| Organism | Methylococcus sp. Mc7 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3181493..3191906
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KW115_RS15400 (KW115_15400) | - | 3182270..3182968 (+) | 699 | WP_218806544.1 | glycosyltransferase | - |
| KW115_RS15405 (KW115_15405) | - | 3183001..3184761 (+) | 1761 | WP_218806545.1 | tetratricopeptide repeat protein | - |
| KW115_RS15410 (KW115_15410) | - | 3184758..3186374 (+) | 1617 | WP_218806546.1 | tetratricopeptide repeat protein | - |
| KW115_RS15415 (KW115_15415) | comP | 3186493..3186906 (+) | 414 | WP_218806547.1 | pilin | Machinery gene |
| KW115_RS15420 (KW115_15420) | - | 3186957..3188990 (-) | 2034 | WP_218806548.1 | tetratricopeptide repeat protein | - |
| KW115_RS15425 (KW115_15425) | - | 3189021..3190043 (-) | 1023 | WP_218806549.1 | glycosyltransferase | - |
| KW115_RS15430 (KW115_15430) | - | 3190115..3191233 (-) | 1119 | WP_218806550.1 | DegT/DnrJ/EryC1/StrS aminotransferase family protein | - |
| KW115_RS15435 (KW115_15435) | - | 3191221..3191631 (-) | 411 | WP_218806551.1 | FdtA/QdtA family cupin domain-containing protein | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14002.26 Da Isoelectric Point: 8.8409
>NTDB_id=587641 KW115_RS15415 WP_218806547.1 3186493..3186906(+) (comP) [Methylococcus sp. Mc7]
MKAVQKGFTLIELMIVVAIIGVLAAVALPAYQDYTVRAKVSELLLTAAKYRTDITEKCQLAGTCTASGTSLTVQIGGKIT
GGSVSDDGIVKIKGSTATDSVGAAVSITLTPSWNSAMGSAVWSCTGAPARYVPGSCR
MKAVQKGFTLIELMIVVAIIGVLAAVALPAYQDYTVRAKVSELLLTAAKYRTDITEKCQLAGTCTASGTSLTVQIGGKIT
GGSVSDDGIVKIKGSTATDSVGAAVSITLTPSWNSAMGSAVWSCTGAPARYVPGSCR
Nucleotide
Download Length: 414 bp
>NTDB_id=587641 KW115_RS15415 WP_218806547.1 3186493..3186906(+) (comP) [Methylococcus sp. Mc7]
ATGAAAGCGGTGCAAAAAGGTTTTACATTGATCGAGCTGATGATCGTCGTGGCGATCATCGGCGTCTTGGCCGCGGTCGC
CTTGCCGGCCTACCAGGACTATACGGTTCGGGCCAAGGTTTCAGAACTGCTTCTCACGGCTGCGAAATATCGAACCGACA
TCACTGAAAAATGCCAGTTGGCTGGTACTTGTACCGCTTCTGGGACCAGTCTGACAGTCCAAATTGGTGGAAAGATAACG
GGCGGTAGCGTTAGCGACGATGGAATTGTCAAAATAAAGGGAAGTACGGCAACTGATAGCGTAGGTGCGGCTGTAAGTAT
TACGCTTACTCCAAGCTGGAACTCGGCAATGGGGTCGGCTGTTTGGTCGTGCACCGGTGCGCCGGCCAGATACGTACCAG
GCTCGTGCCGCTGA
ATGAAAGCGGTGCAAAAAGGTTTTACATTGATCGAGCTGATGATCGTCGTGGCGATCATCGGCGTCTTGGCCGCGGTCGC
CTTGCCGGCCTACCAGGACTATACGGTTCGGGCCAAGGTTTCAGAACTGCTTCTCACGGCTGCGAAATATCGAACCGACA
TCACTGAAAAATGCCAGTTGGCTGGTACTTGTACCGCTTCTGGGACCAGTCTGACAGTCCAAATTGGTGGAAAGATAACG
GGCGGTAGCGTTAGCGACGATGGAATTGTCAAAATAAAGGGAAGTACGGCAACTGATAGCGTAGGTGCGGCTGTAAGTAT
TACGCTTACTCCAAGCTGGAACTCGGCAATGGGGTCGGCTGTTTGGTCGTGCACCGGTGCGCCGGCCAGATACGTACCAG
GCTCGTGCCGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Acinetobacter baylyi ADP1 |
42.581 |
100 |
0.482 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
36.364 |
100 |
0.438 |
| pilA2 | Legionella pneumophila str. Paris |
42.446 |
100 |
0.431 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
42.446 |
100 |
0.431 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
36.478 |
100 |
0.423 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
40 |
100 |
0.423 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
35.333 |
100 |
0.387 |
| pilA/pilA1 | Eikenella corrodens VA1 |
34.211 |
100 |
0.38 |
| pilA | Haemophilus influenzae 86-028NP |
36.364 |
100 |
0.38 |
| pilA | Pseudomonas aeruginosa PAK |
33.548 |
100 |
0.38 |