Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | I872_RS00865 | Genome accession | NC_021175 |
| Coordinates | 157678..158073 (+) | Length | 131 a.a. |
| NCBI ID | WP_015604291.1 | Uniprot ID | A0A0F2CUG1 |
| Organism | Streptococcus cristatus AS 1.3089 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 152678..163073
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I872_RS00830 (I872_00775) | - | 152686..152889 (+) | 204 | WP_002896748.1 | helix-turn-helix transcriptional regulator | - |
| I872_RS11245 (I872_00780) | - | 152886..153050 (+) | 165 | WP_015604284.1 | hypothetical protein | - |
| I872_RS00835 (I872_00785) | - | 153060..153494 (+) | 435 | WP_015604285.1 | hypothetical protein | - |
| I872_RS00840 (I872_00790) | - | 153548..155032 (-) | 1485 | WP_015604286.1 | DUF1846 domain-containing protein | - |
| I872_RS00845 (I872_00795) | pepA | 155152..156216 (-) | 1065 | WP_015604287.1 | glutamyl aminopeptidase | - |
| I872_RS00850 (I872_00800) | - | 156342..156626 (+) | 285 | WP_015604288.1 | DUF4651 domain-containing protein | - |
| I872_RS00855 (I872_00805) | - | 156626..156940 (+) | 315 | WP_015604289.1 | thioredoxin family protein | - |
| I872_RS00860 (I872_00810) | ytpR | 156971..157597 (+) | 627 | WP_015604290.1 | YtpR family tRNA-binding protein | - |
| I872_RS00865 (I872_00815) | ssbB/cilA | 157678..158073 (+) | 396 | WP_015604291.1 | single-stranded DNA-binding protein | Machinery gene |
| I872_RS00870 (I872_00820) | - | 158334..158630 (+) | 297 | WP_015604292.1 | WXG100 family type VII secretion target | - |
| I872_RS00875 (I872_00825) | - | 158710..159129 (+) | 420 | WP_015604293.1 | DUF5082 domain-containing protein | - |
| I872_RS00880 (I872_00830) | - | 159145..159408 (+) | 264 | WP_015604294.1 | hypothetical protein | - |
| I872_RS12125 (I872_00835) | - | 159432..159653 (+) | 222 | WP_015604295.1 | hypothetical protein | - |
| I872_RS00885 (I872_00840) | - | 159650..160090 (+) | 441 | WP_234702199.1 | DUF4176 domain-containing protein | - |
| I872_RS12460 | - | 160087..161480 (+) | 1394 | Protein_170 | T7SS effector LXG polymorphic toxin | - |
| I872_RS00895 (I872_00855) | - | 161515..162261 (+) | 747 | WP_015604299.1 | hypothetical protein | - |
| I872_RS00900 (I872_00860) | - | 162423..162737 (+) | 315 | WP_015604300.1 | DUF4176 domain-containing protein | - |
| I872_RS12130 | - | 162857..163069 (+) | 213 | WP_041826761.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14702.56 Da Isoelectric Point: 6.4772
>NTDB_id=58435 I872_RS00865 WP_015604291.1 157678..158073(+) (ssbB/cilA) [Streptococcus cristatus AS 1.3089]
MYNKVIIIGRLTATPELHKTANDKSVARATVAVNRRYKSQNGEREADFINLVVWGRLAETLASYASKGSLISLDGELRSR
RYEKDGTTHYVTEVLCSGFQLLESRAQRALRENNTGADLADLVLEEEELPF
MYNKVIIIGRLTATPELHKTANDKSVARATVAVNRRYKSQNGEREADFINLVVWGRLAETLASYASKGSLISLDGELRSR
RYEKDGTTHYVTEVLCSGFQLLESRAQRALRENNTGADLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=58435 I872_RS00865 WP_015604291.1 157678..158073(+) (ssbB/cilA) [Streptococcus cristatus AS 1.3089]
ATGTATAATAAAGTTATCATCATTGGCCGGTTGACGGCTACACCAGAGTTACACAAGACAGCAAATGACAAGTCGGTTGC
GCGTGCGACAGTGGCTGTGAATCGCCGCTACAAGAGTCAAAATGGAGAGCGTGAAGCGGATTTTATCAACCTTGTCGTTT
GGGGACGCTTGGCTGAAACCTTGGCAAGTTACGCTAGTAAGGGGAGTCTGATTTCTCTGGATGGAGAATTGCGGAGCCGT
CGCTATGAAAAGGATGGAACCACTCATTATGTGACAGAAGTTCTTTGCAGTGGTTTTCAGCTTTTAGAAAGCCGAGCCCA
GAGAGCACTCCGTGAGAATAATACTGGAGCAGACCTAGCAGATTTGGTACTGGAAGAAGAGGAACTTCCTTTTTAA
ATGTATAATAAAGTTATCATCATTGGCCGGTTGACGGCTACACCAGAGTTACACAAGACAGCAAATGACAAGTCGGTTGC
GCGTGCGACAGTGGCTGTGAATCGCCGCTACAAGAGTCAAAATGGAGAGCGTGAAGCGGATTTTATCAACCTTGTCGTTT
GGGGACGCTTGGCTGAAACCTTGGCAAGTTACGCTAGTAAGGGGAGTCTGATTTCTCTGGATGGAGAATTGCGGAGCCGT
CGCTATGAAAAGGATGGAACCACTCATTATGTGACAGAAGTTCTTTGCAGTGGTTTTCAGCTTTTAGAAAGCCGAGCCCA
GAGAGCACTCCGTGAGAATAATACTGGAGCAGACCTAGCAGATTTGGTACTGGAAGAAGAGGAACTTCCTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus mitis SK321 |
83.206 |
100 |
0.832 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
82.443 |
100 |
0.824 |
| ssbA | Streptococcus mutans UA159 |
77.863 |
100 |
0.779 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
73.282 |
100 |
0.733 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
58.929 |
85.496 |
0.504 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50 |
80.916 |
0.405 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
45.133 |
86.26 |
0.389 |